YRC Public Data Repository - Protein Structure Prediction

Protein:	CG13926-PA
Organism:	Drosophila melanogaster
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13926-PA.

Description	E-value	Query Range	Subject Range
gi\|125977458, gi... - gi\|54641512\|gb\|EAL30262.1\| GA12631 [Drosophila pseudoobscura pseudoobscura], gi\|125977458\|ref\|XP_001... OPI10_DROPS - Protein OPI10 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA12631 PE=3 SV=1	251.0	[0..3]	[196..1]
C11orf73 - chromosome 11 open reading frame 73 gi\|123998603, gi... - gi\|123998603\|gb\|ABM86903.1\| chromosome 11 open reading frame 73 [synthetic construct], gi\|123984623\|... gi\|114639664, gi... - gi\|114639664\|ref\|XP_001175309.1\| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes], gi\|114... gi\|109108177 - gi\|109108177\|ref\|XP_001102946.1\| PREDICTED: similar to CG13926-PA isoform 4 [Macaca mulatta]	250.0	[0..3]	[196..1]
HIKES_BOVIN - Protein Hikeshi OS=Bos taurus PE=2 SV=1	249.0	[0..3]	[196..1]
gi\|57102310 - gi\|57102310\|ref\|XP_533984.1\| PREDICTED: similar to CG13926-PA isoform 1 [Canis familiaris]	246.0	[0..3]	[196..1]
gi\|116129746, gi... - gi\|118782816\|ref\|XP_312519.3\| AGAP002426-PA [Anopheles gambiae str. PEST], gi\|116129746\|gb\|EAA07533.... OPI10_ANOGA - Protein OPI10 homolog OS=Anopheles gambiae GN=AGAP002426 PE=3 SV=3	246.0	[0..1]	[196..2]
HIKES_MOUSE - Protein Hikeshi OS=Mus musculus GN=L7rn6 PE=1 SV=1 HIKES_RAT - Protein Hikeshi OS=Rattus norvegicus PE=2 SV=2 tr\|G3HXS2\|G3HXS2... - Uncharacterized protein C11orf73-like OS=Cricetulus griseus GN=I79_015835 PE=4 SV=1	246.0	[0..3]	[196..1]

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Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFGLIVSG RLPQSDFVAV DATKLLVNVP DIESVNYLVV FLTGVSPLPV GTSAAIYFSW  60
   61 PDANAAPTWQ YLGHINNTKP SAIFKIAQLK KSHELEAQAH GMVFGSQEIS HIAQIGVSLE 120
  121 PELTVAQQTP AVSTANDNKQ FGQRMLENFF NYASSFGVAA RDIPPISSET FVPFSVVQNW 180
  181 YTNFQRRMEQ NPNFWKY

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	156.744727
Match:	PF05603.3
Description:	No description for PF05603.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits