| Protein: | Pdp1-PB, FBpp029... |
| Organism: | Drosophila melanogaster |
| Length: | 270 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pdp1-PB, FBpp029....
| Description | E-value | Query Range |
Subject Range |
|
|
208.0 | [0..1] | [270..1] |
|
|
203.0 | [0..1] | [270..1] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MSDRERSSPT LIETGLKNLI GGRDGNYPLI SGINGKSTSN SKEIICPDDK YKEEGDIWNV 60
61 EAQTAFLGPN LWDKTLPYDA DLKVTQYADL DEFLSENNIP DGLPGTHLGH SSGLGHRSDS 120
121 LGHAAGLSLG LGHITTKRER SPSPSDCISP DTLNPPSPAE STFSFASSGR DFDPRTRAFS 180
181 DEELKPQPMI KKSRKQFV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [199-270] |
1 11 21 31 41 51
| | | | | |
1 PDELKDDKYW ARRRKNNIAA KRSRDARRQK ENQIAMRARY LEKENATLHQ EVEQLKQENM 60
61 DLRARLSKFQ DV
|
| Detection Method: | |
| Confidence: | 16.221849 |
| Match: | 1gtwA |
| Description: | CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER |
Matching Structure (courtesy of the PDB): |
|
