YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Sgs7-PA
Organism: Drosophila melanogaster
Length: 74 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sgs7-PA.

Description E-value Query
Range
Subject
Range
Sgs8-PA - The gene Salivary gland secretion 8 is referred to in FlyBase by the symbol Dmel\Sgs8 (CG6132, FBgn0...
99.0 [0..1] [73..1]
SGS3_DROER - Salivary glue protein Sgs-3 OS=Drosophila erecta GN=Sgs3 PE=2 SV=2
97.0 [0..26] [74..280]
SGS3_DROYA - Salivary glue protein Sgs-3 OS=Drosophila yakuba GN=Sgs3 PE=2 SV=2
79.0 [0..26] [74..215]
SGS3_DROSI - Salivary glue protein Sgs-3 OS=Drosophila simulans GN=Sgs3 PE=2 SV=2
78.0 [0..26] [74..169]
gi|450903, gi|28... - gi|450903|emb|CAA82672.1| glue protein [Drosophila virilis], gi|433482|emb|CAA53796.1| major larval ...
74.0 [0..26] [74..183]
gi|54640898, gi|... - gi|54640898|gb|EAL29649.1| GA11160-PA [Drosophila pseudoobscura], gi|125979761|ref|XP_001353913.1| G...
64.0 [0..27] [74..242]

Back

Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIAVTIIA CILLIGFSDL ALGGACECQP CGPGGKACTG CPEKPQLCQQ LISDIRNLQQ  60
   61 KIRKCVCGEP QWMI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.423 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.336 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.232 a.44.1 Disulphide-bond formation facilitator (DSBA), insertion domain
View Download 0.210 a.16.1 S15/NS1 RNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle