YRC Public Data Repository - Protein Structure Prediction

Protein:	CG6951-PA, CG6951-PB
Organism:	Drosophila melanogaster
Length:	203 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6951-PA, CG6951-PB.

Description	E-value	Query Range	Subject Range
gi\|46137423, gi\|... - gi\|46137423\|ref\|XP_390403.1\| hypothetical protein FG10227.1 [Gibberella zeae PH-1], gi\|42547227\|gb\|E...	166.0	[0..2]	[176..205]
gi\|78043574, gi\|... - gi\|78043574\|ref\|YP_360307.1\| riboflavin biosynthesis protein RibD [Carboxydothermus hydrogenoformans...	162.0	[0..29]	[203..3]
gi\|15601943, gi\|... - gi\|15601943\|ref\|NP_245015.1\| hypothetical protein PM0078 [Pasteurella multocida subsp. multocida str...	162.0	[0..24]	[203..1]
gi\|28950120 - gi\|28950120\|emb\|CAD70900.1\| probable dCMP deaminase [Neurospora crassa]	161.0	[0..2]	[183..212]
gi\|88184978, gi\|... - gi\|88184978\|gb\|EAQ92446.1\| hypothetical protein CHGG_00681 [Chaetomium globosum CBS 148.51], gi\|1161...	161.0	[0..2]	[175..212]
gi\|32412958, gi\|... - gi\|32412958\|ref\|XP_326959.1\| hypothetical protein [Neurospora crassa], gi\|28922452\|gb\|EAA31684.1\| hy... gi\|85100199 - gi\|85100199\|ref\|XP_960920.1\| hypothetical protein [Neurospora crassa OR74A]	160.0	[0..2]	[177..212]
gi\|83572680, gi\|... - gi\|83589766\|ref\|YP_429775.1\| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosp...	160.0	[0..27]	[203..3]
gi\|76791213, gi\|... - gi\|76791213\|ref\|ZP_00773720.1\| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C...	159.0	[0..25]	[202..4]
gi\|88776020, gi\|... - gi\|88801234\|ref\|ZP_01116773.1\| riboflavin biosynthesis protein [Reinekea sp. MED297], gi\|88776020\|gb...	159.0	[0..24]	[202..3]
gi\|52306511, gi\|... - gi\|52424459\|ref\|YP_087596.1\| hypothetical protein MS0404 [Mannheimia succiniciproducens MBEL55E], gi...	159.0	[0..23]	[198..2]

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Predicted Domain #1

Region A:
Residues: [1-203]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVSAQDLI SQLSKSPESH KRKEYLHWDD YFMATSLLSA KRSKDPVTQV GACIVDSQNR  60
   61 IVAIGYNGFP RNCSDDVFPW SKAKKGSQEF DPLEDKKMYV VHAEANAILN SNGMSLSGTR 120
  121 LYTTLFPCNE CAKLIIQVGI SQVLYLSDKY ADKPTYRASK RMLDAVGVEY KRHIPQKKTI 180
  181 TIDFDTFPEE DPNASLGLNE LHL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.522879
Match:	2g6vA
Description:	No description for 2g6vA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits