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View Structure Prediction Details

Protein: FBpp0308322, FBp...
Organism: Drosophila melanogaster
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308322, FBp....

Description E-value Query
Range
Subject
Range
gi|54639532, gi|... - gi|54639532|gb|EAL28934.1| GA15903 [Drosophila pseudoobscura pseudoobscura], gi|125777951|ref|XP_001...
gi|54639532|gb|E... - GA15903-PA [Drosophila pseudoobscura], GA15903 [Drosophila pseudoobscura pseudoobscura]
321.0 [0..1] [391..1]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTRKVVGI FLATCLLPFT VLQNVAAQGS CRNPNQKQGQ CLSIYDCQSL LSVIQQSYVS  60
   61 PEDRTFLRNS QCLDGVGRQP YVCCTSDRSF GSQEATSAAP PPTTTSSSSR GQDGQAGLGN 120
  121 LLPSPPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 1nfuB
Description: Factor X, N-terminal module
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ErbB-2 class receptor binding 4.87409204815718 bayes_pls_golite062009
growth factor activity 4.72461268561406 bayes_pls_golite062009
receptor binding 4.33045214660893 bayes_pls_golite062009
glycosaminoglycan binding 3.49243532917035 bayes_pls_golite062009
heparin binding 3.18889412817519 bayes_pls_golite062009
protein binding 3.02592228806142 bayes_pls_golite062009
binding 2.97929690141955 bayes_pls_golite062009
extracellular matrix structural constituent 2.9566924002525 bayes_pls_golite062009
ErbB-3 class receptor binding 2.81761382193046 bayes_pls_golite062009
polysaccharide binding 2.79319890241656 bayes_pls_golite062009
transcription regulator activity 2.69962890868723 bayes_pls_golite062009
transcription factor binding 1.99357420899273 bayes_pls_golite062009
transcription cofactor activity 1.84968120946476 bayes_pls_golite062009
molecular transducer activity 1.66401431847753 bayes_pls_golite062009
signal transducer activity 1.66401431847753 bayes_pls_golite062009
epidermal growth factor receptor binding 1.45792086043869 bayes_pls_golite062009
pattern binding 1.26957983931218 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.19712312835758 bayes_pls_golite062009
kinase activity 1.1619124653327 bayes_pls_golite062009
MAP kinase kinase activity 1.02222760216637 bayes_pls_golite062009
protein kinase activity 1.00235965838736 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.993816767146254 bayes_pls_golite062009
cell adhesion molecule binding 0.44857826904729 bayes_pls_golite062009
glycoprotein binding 0.406288006873189 bayes_pls_golite062009
carbohydrate binding 0.37481112933019 bayes_pls_golite062009
calcium ion binding 0.278539506073104 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.20129207512968 bayes_pls_golite062009
enzyme regulator activity 0.0530789686817691 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [128-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CGPHSFSNKV YNGNDTAIDE FNWMALLEYV DNRGRRELSC GGSLINNRYV LTAAHCVIGA  60
   61 VETEVGHLTT VRLGEYDTSK DVDCIDDICN QPILQLGIEQ ATVHPQYDPA NKNRIHDIAL 120
  121 LRLDRPVVLN EYIQPVCLPL VSTRMAINTG ELLVVSGWGR TTTARKSTIK QRLDLPVNDH 180
  181 DYCARKFATR NIHLISSQLC VGGEFYRDSC DGDSGGPLMR RGFDQAWYQE GVVSFGNRCG 240
  241 LEGWPGVYTR VADYMDWIVE TIRP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.0
Match: 2olgA
Description: No description for 2olgA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle