| Protein: | dsx-PB, FBpp0308... |
| Organism: | Drosophila melanogaster |
| Length: | 427 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsx-PB, FBpp0308....
| Description | E-value | Query Range |
Subject Range |
|
|
300.0 | [0..1] | [427..1] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MVSEENWNSD TMSDSDMIDS KNDVCGGASS SSGSSISPRT PPNCARCRNH GLKITLKGHK 60
61 RYCKFRYCTC EKCRLTADRQ RVMALQTALR RAQAQDEQRA LHM
|
| Detection Method: |  |
| Confidence: | 18.522879 |
| Match: | 1lpvA |
| Description: | DM domain of Doublesex (dsx) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [104-299] |
1 11 21 31 41 51
| | | | | |
1 HEVPPANPAA TTLLSHHHHV AAPAHVHAHH VHAHHAHGGH HSHHGHVLHH QQAAAAAAAA 60
61 PSAPASHLGG SSTAASSIHG HAHAHHVHMA AAAAASVAQH QHQSHPHSHH HHHQNHHQHP 120
121 HQQPATQTAL RSPPHSDHGG SVGPATSSSG GGAPSSSNAA AATSSNGSSG GGGGGGGGSS 180
181 GGGAGGGRSS GTSVIT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [300-346] |
1 11 21 31 41 51
| | | | | |
1 SADHHMTTVP TPAQSLEGSC DSSSPSPSST SGAAILPISV SVNRKNG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [347-427] |
1 11 21 31 41 51
| | | | | |
1 ANVPLGQDVF LDYCQKLLEK FRYPWELMPL MYVILKDADA NIEEASRRIE EGQYVVNEYS 60
61 RQHNLNIYDG GELRNTTRQC G
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1zv1A |
| Description: | Crystal structure of the dimerization domain of doublesex protein from D. melanogaster |
Matching Structure (courtesy of the PDB): |
|
