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View Structure Prediction Details

Protein: gish-PC
Organism: Drosophila melanogaster
Length: 427 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gish-PC.

Description E-value Query
Range
Subject
Range
gish-PE - The gene gilgamesh is referred to in FlyBase by the symbol Dmel\gish (CG6963, FBgn0250823). It is a ...
313.0 [0..1] [427..42]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSTRQSVST TTGVLMVGPN FRVGKKIGCG NFGELRLGKN LYNNEHVAIK MEPMKSKAPQ  60
   61 LHLEYRFYKL LGSHADNAPD GIPRIYHLGT CGGRYNAMVL ELLGLSLEDL FNICARKFSL 120
  121 KTVLMIAKQL LHRIEYVHSR HLIYRDVKPE NFLIGRTSTK REKIIHIIDF GLAKEYIDLD 180
  181 TNRHIPYREH KSLTGTARYM SINTHMGREQ SRRDDLEALG HMFMYFLRGS LPWQGLKADT 240
  241 LKERYQKIGD TKRATPIEVL CDGHPEEFAT YLRYVRRLDF FETPDYDFLR RLFQDLFDRK 300
  301 GYTDEGEFDW TGKTMSTPVG SLQTGHEVII SPNKDRHNVT AKTNAKGGVA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.30103
Match: 2chlA
Description: No description for 2chlA was found.

Predicted Domain #2
Region A:
Residues: [351-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AWPDVPKPGA TLGNLTPADR HGSVQVVSST NGELNPDDPT AGHSNTPITQ QPEVEVVDET  60
   61 KCCCFFKRKK KKSTRQK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle