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View Structure Prediction Details

Protein: Sgs5-PA
Organism: Drosophila melanogaster
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sgs5-PA.

Description E-value Query
Range
Subject
Range
CG7587-PA - This gene is referred to in FlyBase by the symbol Dmel\CG7587 (CG7587, FBgn0038523). It is a protein...
221.0 [0..1] [160..1]
gi|54637615, gi|... - gi|54637615|gb|EAL27017.1| GA20459-PA [Drosophila pseudoobscura], gi|125773245|ref|XP_001357881.1| G...
136.0 [0..44] [152..26]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNIKLLLLL LAVSWFHHGQ AVQETKIEEK PVSEPEIESE IKNSTSVPSK CNIYYRNYQW  60
   61 ALQDCVCRCF QNECLMQIES DQRKKEGRSP FVPVTEELCR SFICKKCSVG FPVVAEFPIP 120
  121 APCGCNRKPG SIATERFYSL CHLLKFSAEN SKPFLTYSYC WPF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.499 a.1.1 Globin-like
View Download 0.468 a.1.1 Globin-like
View Download 0.448 a.24.2 Aspartate receptor, ligand-binding domain
View Download 0.432 a.118.18 Cysteine rich protein B (HcpB)
View Download 0.427 a.1.1 Globin-like


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