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View Structure Prediction Details

Protein: FBpp0293851, sll-PA
Organism: Drosophila melanogaster
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0293851, sll-PA.

Description E-value Query
Range
Subject
Range
gi|15292507 - gi|15292507|gb|AAK93522.1| SD04658p [Drosophila melanogaster]
299.0 [0..1] [465..1]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYAYNKMGRV PELVICSFIV VTLLVIHFFS DLLRASLGGY YNQDVTLSQL VESQNSDYAW  60
   61 FLKLLVNCFG YSCVFVPGFL IYKYVGRINY LERG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKTFLHKAIN MCITGNSGYD QLDAGTSTAD KDRPAASTAP KRTSSQEAVQ LLWCFGGLMI  60
   61 SYLTWGVLQE KIM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [168-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQNYLNFTGE SAKFKDSQFL VFSNRLLAFL VALAYLQWQP SPVRHRAPLY KYSYASFSNI  60
   61 MSAWFQYEAL KFVNFPTQVL AKSCKIIPVM LMGKIMSKAK YESYEYVTAL LISLGMIFFM 120
  121 SGSSDS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.22
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #4
Region A:
Residues: [294-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKASGVTTLT GIFLLSMYMV FDSFTANWQG SLFKSYGMTP LQMMCGVNLF SSIFTGASLS  60
   61 MQGGFMDSLA FATEHPKFVF DMVVLSVCSA VGQLFIYHTI DVFGPVVFTI IMTLRQAVAI 120
  121 MLSCFIYQHS ISLLGIFGVL IVFVAIFLRV YCTQRLRAIR KRAEANKPKM AV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle