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View Structure Prediction Details

Protein: CG4362-PA
Organism: Drosophila melanogaster
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4362-PA.

Description E-value Query
Range
Subject
Range
gi|125778161|ref... - GA18133-PA [Drosophila pseudoobscura], GA18133 [Drosophila pseudoobscura pseudoobscura]
gi|54639604, gi|... - gi|54639604|gb|EAL29006.1| GA18133 [Drosophila pseudoobscura pseudoobscura], gi|125778161|ref|XP_001...
298.0 [0..1] [218..1]
gi|21430608 - gi|21430608|gb|AAM50982.1| RE24790p [Drosophila melanogaster]
gi|220948256, gi... - gi|220957424|gb|ACL91255.1| CG15786-PA [synthetic construct], gi|220948256|gb|ACL86671.1| CG15786-PA...
294.0 [0..1] [226..30]
gi|55233648, gi|... - gi|58395618|ref|XP_321387.2| ENSANGP00000011567 [Anopheles gambiae str. PEST], gi|55233648|gb|EAA008...
290.0 [0..4] [210..3]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYLLSMTLL LAIGLQQIDA HGMMLSPPSR SSRWRYDGSA PQNWNDNELF CGGLYTQSNN  60
   61 GGRCGLCGDN FLDAQPRANE IGGSIGGAGV VTRSYVAGNT ITVGVKITTN HLGYFEFHLC 120
  121 NLDAFGAESE ECFDQNRLRF IDGSDRKDIG DQMGEFDVTV VLPEGLTCSH CVLRWTYVGA 180
  181 NNWGICDNSG NGALGCGPQE TFKNCADVSI YWGRNLVKEL VGGGDPVAPV EVA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.54
Match: 2bemA
Description: Crystal structure of the Serratia marcescens chitin-binding protein CBP21
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle