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View Structure Prediction Details

Protein: CG5849-PA
Organism: Drosophila melanogaster
Length: 968 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5849-PA.

Description E-value Query
Range
Subject
Range
gi|66512450 - gi|66512450|ref|XP_396261.2| PREDICTED: similar to CG14516-PA, isoform A isoform 1 [Apis mellifera]
705.0 [0..28] [923..87]

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Predicted Domain #1
Region A:
Residues: [1-968]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITPPSGVVV LVTLGLLVSG SMGERERSLR LPNATYPLFY QLHISSDIHK GQLLFSGNAT  60
   61 IDVAIRQSTN EIVLHAKNLT DIQITVHRLM AEGSEIVDDL THTLHPTAAL LIIHPIENYQ 120
  121 AFEEGQQYRL EILYTAIMAS RPAGLYYMDY RDEENNHTVY VAATQCEPTY GRLIFPCYDE 180
  181 PGFKSNFSIK ITHGSSHSAI SNMPVKEVLA HGDLKTTSFH TTPPISTYLV AFVISDFGSI 240
  241 SETYRGITQS IYTSPTSKEK GQVALKNAVR TVAALEDYFG VSYPLPKLDH VALKKNYGAA 300
  301 MENWGLITYK DVNLLKNISS DGQKRKLDLI TQNHEIAHQW FGNLVSPEWW TYTWMNEGFA 360
  361 TYFSYVITDL IYPNDKMMDM FMTHEADSAY SYNSFFDVHP MSHYVEGEKD IMGVFDIISY 420
  421 KRGACVIKMF HHAFRQKLFV RGISHFLEKY RYSVANELNL FDALHSELQD DEYFSHQPWA 480
  481 SRIREIMLSW THSEWLPILV VTRNYENNTI TFTQRSVHMK DELWWIPINF ATTQSPNFED 540
  541 TQVDMFMPPQ PQYTVSLEDL NIHVSGRDWI MVNKQHTGFY LVRYDTDNLM AIARQLQTNH 600
  601 SVIHPINRLG LFRDLGPLIE HNEIEQVEVV FELLKYLELE EDVLTWNQLQ DTIECLTRNL 660
  661 HGTSSQSLFN EFVRRLVGPT FRRVYVEQGV NLAEDGMFRG ILEIACSADL PECLEYTRRL 720
  721 AKEHIIDKIY FKDGSDYHAI IDSVLCMGVR YLSDQDFQRI IDMMQEIDRA SVYYDDIIYA 780
  781 LRCTQSHRHL LYYLEGLMGE NSTHMVLSEF EDLMYLLYIY KSNLASRPVI WQYIERNYKV 840
  841 LCRAPNFLEH FKQLAGFVPR HQRSHFERLR QTIANHMMQE GLNTNQTLIE VDSPLVGKKM 900
  901 KITENFQDKF EQQIHKWLLN ELPQATSRSD ALLSASLSAA NGSSRPQGVL KEATRVLRSA 960
  961 LRIVDMYR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 125.0
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle