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View Structure Prediction Details

Protein: Gr94a-PA
Organism: Drosophila melanogaster
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr94a-PA.

Description E-value Query
Range
Subject
Range
gi|125774019|ref... - GA17266-PA [Drosophila pseudoobscura], Gr97a [Drosophila pseudoobscura pseudoobscura]
gi|54638004, gi|... - gi|54638004|gb|EAL27406.1| Gr97a [Drosophila pseudoobscura pseudoobscura], gi|125774019|ref|XP_00135...
195.0 [0..3] [404..25]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFTSDYAHR RMVKFLTIIL IGFMTVFGLL ANRYRAGRRE RFRFSKANLA FASLWAIAFS  60
   61 LVYGRQIYKE YQEGQINLKD ATTLYSYMNI TVAVINYVSQ MIISDHVAKV LSKVPFFDTL 120
  121 KEFRLDSRSL YISIVLALVK TVAFPLTIEV AFILQQRRQH PEMSLIWTLY RLFPLIISNF 180
  181 LNNCYFGAMV VVKEILYALN RRLEAQLQEV NLLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [215-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKDQLKLYTK YYRMQRFCAL ADELDQLAYR YRLIYVHSGK YLTPMSLSMI LSLICHLLGI  60
   61 TVGFYSLYYA IADTLIMGKP YDGLGSLINL VFLSISLAEI TLLTHLCNHL LVATRRSAVI 120
  121 LQEMNLQHAD SRYRQAVHGF TLLVTVTKYQ IKPLGLYELD MRLISNVFSA VASFLLILVQ 180
  181 ADLSQRFKMQ 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle