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View Structure Prediction Details

Protein: gi|10726732, gi|...
Organism: Drosophila melanogaster
Length: 581 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10726732, gi|....

Description E-value Query
Range
Subject
Range
gi|54638383, gi|... - gi|54638383|gb|EAL27785.1| GA11661-PA [Drosophila pseudoobscura], gi|125774785|ref|XP_001358644.1| G...
797.0 [0..1] [581..1]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRIKDIRW LSVWCRRFTV DFGEVFIPPN LDVPKPRVLP EFKRLAHGLR SSNISVLDAK  60
   61 TFYIPNLHYD GAGPDAYFWV GNGSEPNIMG IKVPNESGSL EPLRGYQGED IEIQLPESLT 120
  121 VYDIDWLAVW CVEYRHNFGH VYIPRDLDVP PAL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQTKITTTTT PRPVYSNCRE ILPNKLQIKW ELQGEYLQVE LFGRITEDQY MAFGLSGANG  60
   61 RAQMSQSDVV VAFYDTTTRV FRAEDYFISD LSQCDGQRGA CPDERIGGRN DVIVLSGDRK 120
  121 NGVTSIRYKR LLQPNEAIYD APIPTDREVS VIAAIGPLNA RKEANAHSHT ASDHNQDDIR 180
  181 INFSARNDHA CQSSLYDVKD ESGPRPWPTR KIEGVRKFRA SIGPTGGKRG YTSITGVPSW 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.3
Match: 1d7cA
Description: Cytochrome domain of cellobiose dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [394-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIAWYVNDLL IPEITVERGL TYEFIIEGGN DPSQPARYHP FYITDSPEGG LGQKMGLEAR  60
   61 KQKAYAGVEY DEDGNAIPTG GGRYCEWEHQ TIDRSAEIDT FEEYMKTLVF KCEDGEPGYL 120
  121 NWTVPTNAPD QLYYQCFTHN NLGWKINVVD MGSSGGSKVS SHQFSFYGIF TVFSLVATSL 180
  181 PFFGHVLA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.969
Match: 1ov8A
Description: Auracyanin B structure in space group, P65
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle