YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ash2-PC
Organism: Drosophila melanogaster
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ash2-PC.

Description E-value Query
Range
Subject
Range
ASH2L - ash2 (absent, small, or homeotic)-like (Drosophila)
gi|168277868 - gi|168277868|dbj|BAG10912.1| Set1/Ash2 histone methyltransferase complex subunit ASH2 [synthetic con...
340.0 [0..2] [551..64]

Back

Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSQMDTSS PTESSSEVNF TAEEDKSQET RSAAGVCYCG KERNLNIVEL LCATCSRWVH  60
   61 ETCVSYQLGK GKLLPFITNY VFVCKNCSAS GLESFRKSQA TISQMCHCAI ANMQQAASRD 120
  121 GRRQIQFSKD KEIIPYIEQY WEAMTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2f6jA
Description: No description for 2f6jA was found.

Predicted Domain #2
Region A:
Residues: [147-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRLTQSWY STVQRSLVKD VQTLFTYEEH AEHGAMYGLF HQDLRIIKPN YESMSKSGAL  60
   61 RLTDDGYTQA SLSKNNRQKR KFPGTDSGPT GKKGRPSSDI TANVKLPPHG YPLEHPFNKD 120
  121 GYRYILAEPD PHAPFRQEFD ESSDWAGKPI 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [297-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGWLYRILVP HSVLLALHDR APQLKISEDR LAVTGERGYC MVRATHSVNR GCWYFEVTIE  60
   61 EMPDGAATRL GWGREYGNLQ APLGYDKFGY SWRSRKGTKF TESHGKHYSD AYVEGDTLGF 120
  121 LIELPEEASL DYLPNTFKDR PLVKFKSHLY YEDKDKITET LKNLHILQGS RIEFFKNGQS 180
  181 QGVAFEDIYA GSYFPAISIH KSATVSVNFG PAFKYPEVLV EHKAKGMHDR VEELITEQCL 240
  241 ADTLYLTEHD GRLRLDNMGL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2fnjA
Description: No description for 2fnjA was found.

Predicted functions:

Term Confidence Notes
binding 2.40096962515027 bayes_pls_golite062009
transcription regulator activity 2.15398264148864 bayes_pls_golite062009
nucleic acid binding 1.95513305822187 bayes_pls_golite062009
protein binding 1.80794638640093 bayes_pls_golite062009
DNA binding 1.80079581406991 bayes_pls_golite062009
transcription activator activity 1.26528137349343 bayes_pls_golite062009
transcription factor activity 1.15427978494805 bayes_pls_golite062009
structural molecule activity 0.591248843231149 bayes_pls_golite062009
protein kinase activity 0.349782201631236 bayes_pls_golite062009
cytoskeletal protein binding 0.256457488897892 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.145569571363938 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0116447990963908 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle