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View Structure Prediction Details

Protein: ash2-PB
Organism: Drosophila melanogaster
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ash2-PB.

Description E-value Query
Range
Subject
Range
gi|45551962, gi|... - gi|45551962|ref|NP_733023.2| absent, small, or homeotic discs 2 CG6677-PA, isoform A [Drosophila mel...
313.0 [0..9] [350..282]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSFTDEES SLSKNNRQKR KFPGTDSGPT GKKGRPSSDI TANVKLPPHG YPLEHPFNKD  60
   61 GYRYILAEPD PHAPFRQEFD ESSDWAGKPI PGWLYRILVP HSVLLALHDR APQLKISEDR 120
  121 LAVTGERGYC MVRATHSVNR GCWYFEVTIE EMPDGAATRL GWGREYGNLQ APLGYDKFGY 180
  181 SWRSRKGTKF TESHGKHYSD AYVEGDTLGF LIELPEEASL DYLPNTFKDR PLVKFKSHLY 240
  241 YEDKDKITET LKNLHILQGS RIEFFKNGQS QGVAFEDIYA GSYFPAISIH KSATVSVNFG 300
  301 PAFKYPEVLV EHKAKGMHDR VEELITEQCL ADTLYLTEHD GRLRLDNMGL 

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Detection Method: PSI-BLAST
Confidence: 32.39794
Match: 2fnjA
Description: No description for 2fnjA was found.

Predicted functions:

Term Confidence Notes
binding 2.40096962515027 bayes_pls_golite062009
transcription regulator activity 2.15398264148864 bayes_pls_golite062009
nucleic acid binding 1.95513305822187 bayes_pls_golite062009
protein binding 1.80794638640093 bayes_pls_golite062009
DNA binding 1.80079581406991 bayes_pls_golite062009
transcription activator activity 1.26528137349343 bayes_pls_golite062009
transcription factor activity 1.15427978494805 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle