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View Structure Prediction Details

Protein: nct-PA, nct-PC
Organism: Drosophila melanogaster
Length: 695 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nct-PA, nct-PC.

Description E-value Query
Range
Subject
Range
gi|27819920 - gi|27819920|gb|AAO25002.1| LD36812p [Drosophila melanogaster]
654.0 [0..1] [695..15]

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Predicted Domain #1
Region A:
Residues: [1-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMRLNAASI WLLILSYGAT IAQGERTRDK MYEPIGGASC FRRLNGTHQT GCSSTYSGSV  60
   61 GVLHLINVEA DLEFLLSSPP SPPYAPMIPP HLFTRNNLMR LKEAGPKNIS VVLLINRTNQ 120
  121 MKQFSHELNC PNQYSGLNST SETCDASNPA KNWNPWGTGL LHEDFPFPIY YIADLDQVTK 180
  181 LEKCFQDFNN HNYETHALRS LCAVEVKSFM SAAVNTEVCM RRTNFINNLG GSKYCDPLEG 240
  241 RNVYATLYPR KPAIENNLET VHTNEKFILV TCRLDTTTMF DGVGLGAMDS LMGFAVFTHV 300
  301 AYLLKQLLPP QSKDLHNVLF VTFNGESYDY IGSQRFVYDM EKLQFPTEST GTPPIAFDNI 360
  361 DFMLDIGTLD DISNIKLHAL NGTTLAQQIL ERLNNYAKSP RYGFNLNIQS EMSAHLPPTS 420
  421 AQSFLRRDPN FNALILNARP TNKYYHSIYD DADNVDFTYA NTSKDFTQLT EVNDFKSLNP 480
  481 DSLQMKVRNV SSIVAMALYQ TITGKEYTGT KVANPLMADE FLYCFLQSAD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.39794
Match: 2ootA
Description: No description for 2ootA was found.

Predicted functions:

Term Confidence Notes
peptidase activity 4.69852272549237 bayes_pls_golite062009
hydrolase activity 4.23257784904124 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 4.21193944512431 bayes_pls_golite062009
transmembrane receptor activity 3.68442839136734 bayes_pls_golite062009
receptor activity 3.43249110530054 bayes_pls_golite062009
molecular transducer activity 2.61784313760368 bayes_pls_golite062009
signal transducer activity 2.61784313760368 bayes_pls_golite062009
metallopeptidase activity 2.04062448553328 bayes_pls_golite062009
exopeptidase activity 1.5759162922092 bayes_pls_golite062009
catalytic activity 1.3989281287879 bayes_pls_golite062009
binding 0.899461642061592 bayes_pls_golite062009
carboxypeptidase activity 0.891655769761122 bayes_pls_golite062009
endopeptidase activity 0.529831416345723 bayes_pls_golite062009
metalloexopeptidase activity 0.472688733072762 bayes_pls_golite062009
nucleic acid binding 0.385009026435495 bayes_pls_golite062009
metallocarboxypeptidase activity 0.180859448845431 bayes_pls_golite062009
transcription regulator activity 0.140274984043468 bayes_pls_golite062009
aminopeptidase activity 0.0966237570696103 bayes_pls_golite062009
protein binding 0.00854198798870509 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [531-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CPLFKAASYP GSQLTNLPPM RYISVLGGSQ ESSGYTYRLL GYLLSQLQPD IHRDNCTDLP  60
   61 LHYFAGFNNI GECRLTTQNY SHALSPAFLI DGYDWSSGMY STWTESTWSQ FSARIFLRPS 120
  121 NVHQVTTLSV GIVVLIISFC LVYIISSRSE VLFEDLPASN AALFG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle