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View Structure Prediction Details

Protein: CG31108-PA, FBpp...
Organism: Drosophila melanogaster
Length: 917 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31108-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|54640423, gi|... - gi|54640423|gb|EAL29353.1| GA16014-PA [Drosophila pseudoobscura], gi|126002561|ref|XP_001382207.1| G...
857.0 [0..1] [913..1]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSLCEALT NSSISFDYQK EDDWITSGKL GSREAVLVFR TNILNPKIRK TLSEKSSAQV  60
   61 LTDTKDNEEK PVQSPQKLAE EEPTSSEPSS KEALSGSTQQ KIFLLKKPQQ CDKSDKLTFS 120
  121 SPFKKILNRY SSSDTSISSE GEEPANSSEN KSRVLKTSQN AINIKLATDL SNESGYESIA 180
  181 PAKTISNTEV IEEDQEETSE DDAECG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [207-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INMPASKLKI TYKFHQTETK LLRKLFNVHG LTEVQGENNN FNLLWTGVHM KLDIVRNLAP  60
   61 YQRVNHFPRS YEMTRKDRLY KNIERMQHLR GMKHFDIVPQ TFVLPIESRD LVVAHNKHRG 120
  121 PWIVKPAASS RGRGIFIVNS PDQIPQDEQA VVSKYIVDPL CIDGHKCDLR VYVLVTSFDP 180
  181 LIIYLYEEGI VRLATVKYDR HADNLWNPCM HLCNYSINKY HSDYIRSSDA QDEDVGHKWT 240
  241 LSALLRHLKL QSCDTRQLML NIEDLIIKAV LACAQSIISA CRMFVPNGNN CFELYGFDIL 300
  301 IDNALKPWLL EINLSPSMGV DSPLDTKVKS CLMADLLTCV GIPAYSPEMK SHYDQKWSRF 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.95
Match: 2p0aA
Description: No description for 2p0aA was found.

Predicted Domain #3
Region A:
Residues: [567-685]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSSSCQRIAT FPSTSQKTKK SKKKGAAINL NLTGEEQRIL RNARLQYSRR GGFVRIFPTD  60
   61 DSMQRYGNFL DSANGIPIST PNVQSQTFQT PIIQHNYNQM LHQNLYSKDG RQKQDDNNE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [686-917]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADRIWQYERA LETDSEIPFV KKPTVEKCEV EGRRLRKIML KKISNGSELT PFQARQTFSM  60
   61 YLESVLRRLT EDPKDNHEKI ILKFLNKFGG SVKPPVMFRN MQTIKVASKA RSAMVAKLLG 120
  121 DFLENYKRDT EAYVDSFDHF GMIPSSAYNQ FLMHAQESDL EAVLTLHTNV TGIMPFLYNR 180
  181 CGLSVPPTPP IPSGLHGFLR ALPSMVSSTG INRELSKYDG YFKNFDKEKV FL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle