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View Structure Prediction Details

Protein: CG4774-PA, CG477...
Organism: Drosophila melanogaster
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4774-PA, CG477....

Description E-value Query
Range
Subject
Range
gi|54639282, gi|... - gi|54639282|gb|EAL28684.1| GA18422 [Drosophila pseudoobscura pseudoobscura], gi|125777227|ref|XP_001...
gi|54639282|gb|E... - GA18422-PA [Drosophila pseudoobscura], GA18422 [Drosophila pseudoobscura pseudoobscura]
297.0 [0..1] [322..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPAIIFRQV QRPLHHGAAT LEHVLGVGGS SFVNCLNRYA AATGFIRISF LDIKRRRNYE  60
   61 LARLRLYADE KKQSLHLRTL QGRHLLQGVI ERKNFLVDDI REARHKVQER VREKIDEIRE 120
  121 ERENIMTIPN MLTISRAVLS PYIGYVIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGDFTLGMSL LAFAGITDLL DGQIARRWPS QASKFGSFLD PMADKLLMGS LVISLCYTDL  60
   61 LPMWLMGIVV FRDVFLLGAG FVIRYISLPP PKTFSRYFDA THVTAQLEPT LLSKINTGVQ 120
  121 LATIGLSLGA PIWNYLDHPA LQGLWYLTGL TTAATALSYV MNRHNTFKII QKKT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.721246
Match: PF01066.12
Description: No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle