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View Structure Prediction Details

Protein: Gr97a-PA
Organism: Drosophila melanogaster
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr97a-PA.

Description E-value Query
Range
Subject
Range
gi|125774019|ref... - GA17266-PA [Drosophila pseudoobscura], Gr97a [Drosophila pseudoobscura pseudoobscura]
gi|54638004, gi|... - gi|54638004|gb|EAL27406.1| Gr97a [Drosophila pseudoobscura pseudoobscura], gi|125774019|ref|XP_00135...
202.0 [0..1] [423..1]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLRRQTRR LRSIWQRSLP VRFRRGKLHT QLVTICLYAT VFLNILYGVY LGRFSFRRKK  60
   61 FVFSKGLTIY SLFVATFFAL FYIWNIYNEI STGQINLRDT IGIYCYMNVC VCLFNYVTQW 120
  121 EKTLQIIRFQ NSVPLFKVLD SLDISAMIVW RAFIYGLLKI VFCPLITYIT LILYHRRSIS 180
  181 ESQWTSVTTT KTMLPLIVSN QINNCFFGGL VLANLIFAAV NRKLHGIVKE ANMLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [236-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPVQMNLHKP YYRMRRFCEL ADLLDELARK YGFTASRSKN YLRFTDWSMV LSMLMNLLGI  60
   61 TMGCYNQYLA IADHYINEEP FDLFLAIVLV VFLAVPFLEL VMVARISNQT LTRRTGELLQ 120
  121 RFDLQHADAR FKQVVNAFWL QVVTINYKLM PLGLLELNTS LVNKVFSSAI GSLLILIQSD 180
  181 LTLRFSLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle