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View Structure Prediction Details

Protein: Obp99c-PA
Organism: Drosophila melanogaster
Length: 151 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp99c-PA.

Description E-value Query
Range
Subject
Range
gi|33328925 - gi|33328925|gb|AAQ09869.1| CG7584 [Drosophila yakuba]
118.0 [0..1] [139..1]
gi|5081571 - gi|5081571|gb|AAD39447.1|AF133635_1 pheromone binding protein [Ostrinia nubilalis]
118.0 [0..2] [145..5]
PBP_MANSE - Pheromone-binding protein OS=Manduca sexta PE=1 SV=1
117.0 [0..2] [145..8]
gi|5081561 - gi|5081561|gb|AAD39442.1|AF133630_1 pheromone binding protein [Ostrinia furnacalis]
117.0 [0..2] [145..5]
gi|27414067 - gi|27414067|gb|AAO12100.1| odorant-binding protein AgamOBP9 [Anopheles gambiae]
gi|31203787, gi|... - gi|31203787|ref|XP_310842.1| odorant binding protein (AGAP000278-PA) [Anopheles gambiae str. PEST], ...
117.0 [0..1] [130..1]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKYLIVALA LCAVAHADDW TPKTGEEIRK IRVDCLKENP LSNDQISQLK NLIFPNEPDV  60
   61 RQYLTCSAIK LGIFCDQQGY HADRLAKQFK MDLSEEEALQ IAQSCVDDNA QKNPTDVWAF 120
  121 RGHQCMMASK IGDKVRAFVK AKAEEAKKKA A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 2erbA
Description: AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle