YRC Public Data Repository - Protein Structure Prediction

Protein:	Tpi-PC, Tpi-PB
Organism:	Drosophila melanogaster
Length:	247 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Tpi-PC, Tpi-PB.

Description	E-value	Query Range	Subject Range
gi\|12621074, gi\|... - gi\|538426\|gb\|AAA42278.1\| triosephosphate isomerase, gi\|1351280\|sp\|P48500\|TPIS_RAT Triosephosphate is...	370.0	[0..2]	[247..4]
TPI1 - triosephosphate isomerase 1 TPIS_PANTR - Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2 gi\|123993147, gi... - gi\|124000137\|gb\|ABM87577.1\| triosephosphate isomerase 1 [synthetic construct], gi\|123993147\|gb\|ABM84...	368.0	[0..2]	[247..4]
gi\|223374 - gi\|223374\|prf\|\|0801190A isomerase,triosephosphate TPIS_RABIT - Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1	367.0	[0..2]	[247..3]
gi\|55730014 - gi\|55730014\|emb\|CAH91732.1\| hypothetical protein [Pongo abelii] TPIS_PONAB - Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1	367.0	[0..2]	[247..4]

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Predicted Domain #1

Region A:
Residues: [1-247]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKFCVGGN WKMNGDQKSI AEIAKTLSSA ALDPNTEVVI GCPAIYLMYA RNLLPCELGL  60
   61 AGQNAYKVAK GAFTGEISPA MLKDIGADWV ILGHSERRAI FGESDALIAE KAEHALAEGL 120
  121 KVIACIGETL EEREAGKTNE VVARQMCAYA QKIKDWKNVV VAYEPVWAIG TGQTATPDQA 180
  181 QEVHAFLRQW LSDNISKEVS ASLRIQYGGS VTAANAKELA KKPDIDGFLV GGASLKPEFV 240
  241 DIINARQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	102.0
Match:	2i9eA
Description:	No description for 2i9eA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits