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View Structure Prediction Details

Protein: CG15547-PA
Organism: Drosophila melanogaster
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15547-PA.

Description E-value Query
Range
Subject
Range
gi|206580, gi|13... - gi|206580|gb|AAA42017.1| RBL-NDP kinase 18kDa subunit (p18), ref|NP_114021.1| nucleoside diphosphate...
247.0 [0..2] [135..4]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFENSLFIIK PDYLHKRRPV LLKLLAEGFQ IQGNRRIAFS PETAAEFYAD YADEKGFMLE  60
   61 VILLSKGVSE AFIVTKENAV QELLNIMICY FGSASDLERN IHVTKNSYSV AREINFIFPN 120
  121 YIHEPHQMFD HNNFCNRPML KP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.522879
Match: 1nskR
Description: Nucleoside diphosphate kinases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 3.35981009046932 bayes_pls_golite062009
nucleoside diphosphate kinase activity 3.25178488081583 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 3.00995437354018 bayes_pls_golite062009
kinase activity 1.58348632049803 bayes_pls_golite062009
catalytic activity 1.54275558650196 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.10074088410853 bayes_pls_golite062009
transferase activity 1.01095942675678 bayes_pls_golite062009
binding 0.8707688422879 bayes_pls_golite062009
protein binding 0.136008742581077 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [143-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLEEIYDIMQ NTDCSQENWK VRVSDYLVRS NPKMPEISNQ CQQRPDVAIQ DKSQQTTMTY  60
   61 APKPSARAAQ PGVKKTQSSS APLSTTSPHS SMLLSSSSCV TCGGFERSQP GISDLDLNKR 120
  121 VEPHDEEPVC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [273-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDEEILWKEV IVYEEIQPEA EEQESKEDLH DLEEEGVGES GGSDAESDRS VHEAPPPPAQ  60
   61 DDESEEGDAA AGEPGETAPA PEVAPPAQEA TAAPEVPAVA EEHPHAAEAP AEEAPPGE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle