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View Structure Prediction Details

Protein: CG3038-PA
Organism: Drosophila melanogaster
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3038-PA.

Description E-value Query
Range
Subject
Range
gi|6691804 - gi|6691804|emb|CAB65849.1| EG:BACR37P7.1 [Drosophila melanogaster]
302.0 [0..1] [388..1]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMRGRRLLP IILSLLLIVL LSLCYFSNHL RDSSQSRKNG FLLHLPLETK RNPSNPNTPL  60
   61 SNLLNLTDFH YLLASNVCRK A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRELLAVLIV TSYAGHDALR SAHRQAIPQS KLEEMGLRRV FLLAALPSRE HFISQDQLAS  60
   61 EQNRFGDLLQ GNFIEDYRNL SYKHVMGLKW VSEECKKQAK FIIKLDDDII YDVFHLRRYL 120
  121 ETLEVREPGL ATSSTLLSGY VLDAKPPIRL RANKWYVSKK EYPQALYPAY LSGWLYVTNV 180
  181 PTAERIVAEA ERMSFFWIDD TWLTGVVRTR LGIPLERHND WFSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 2j0aA
Description: No description for 2j0aA was found.

Predicted Domain #3
Region A:
Residues: [306-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAEFIDCCVR DLKKHNYECE YSVGPNGGDD RLLVEFLHNV EKCYFDECVK RPVGKSLKET  60
   61 CLAAAKSRPP KHGFPEIKAL RLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle