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View Structure Prediction Details

Protein: boi-PA
Organism: Drosophila melanogaster
Length: 547 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for boi-PA.

Description E-value Query
Range
Subject
Range
gi|16902034 - gi|16902034|gb|AAL27644.1| SD07678p [Drosophila melanogaster]
306.0 [0..14] [547..465]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWSGNARYS NVQNSSMVPP SRPNVTRLSD ESVMLRWSVP QNSGLQITFF KVQYRMLGDG  60
   61 KNRRKNWQTT SDNIPYGNAH GSGPGQGNSH WRARNRDREY EMGNPPKNFT SSVTGLTAGK 120
  121 YYRFRIVAVY SNNDNKEGNT SLKFFLQNGT SKSNLPVPEL REVETLSESA VVLHWSLVSS 180
  181 TQNEDIDGYY AYYRPADSAA EYLKATVDGG MSRSFKIDLL RPGTPYEFKL QSFNSDAASE 240
  241 FSAIRQARTR KTHE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.39794
Match: 2ibgA
Description: No description for 2ibgA was found.

Predicted Domain #2
Region A:
Residues: [255-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPASSSATPV PANKAVEQHQ NSLYPLIAGA AGGGILLLIA SLVVCLCLKR RENSQPEDEN  60
   61 KPQLEHIQAD FVTSAVLGVG GHHKSGDVRR LNGVIPRMNI T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [356-547]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNPLAQETAS DKNNSGLHQN GLHHAQPYHP PGTPTLMHKR LDYHQQPPPV PPHSAYYQQA  60
   61 PTHQPSPMME RSVRGHQQPG GFHMEEGTPT PTRIPSLRRQ RRTSGNQQVH NSHSNLNIGL 120
  121 SHHNNNNNNL PPHHQHLHHH PGHPGGLVGI PIVPGSPRVQ RSPMPSRAMI KRTRLGSHTD 180
  181 NISSGSLNSI EV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle