YRC Public Data Repository - Protein Structure Prediction

Protein:	CG15912-PA
Organism:	Drosophila melanogaster
Length:	246 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15912-PA.

Description	E-value	Query Range	Subject Range
gi\|66770823 - gi\|66770823\|gb\|AAY54723.1\| IP08228p [Drosophila melanogaster]	163.0	[0..1]	[246..2]
GPH_SHISS - Phosphoglycolate phosphatase OS=Shigella sonnei (strain Ss046) GN=SSON_3516 PE=3 SV=1	149.0	[0..8]	[243..1]
gi\|14591678, gi\|... - gi\|3258380\|dbj\|BAA31063.1\| 217aa long hypothetical protein [Pyrococcus horikoshii OT3], gi\|14591678\|... gi\|7428124 - pir\|\|H71208 hypothetical protein PH1936 - Pyrococcus horikoshii	149.0	[0..14]	[245..2]
EG11871 - phosphoglycolate phosphatase / Phosphoglycolate phosphatase; in dam operon; involved in degradation ... gi\|194421583, gi... - gi\|83585104\|ref\|ZP_00923756.1\| COG0546: Predicted phosphatases [Escherichia coli 101-1], gi\|19443949... gi\|75211751, gi\|... - gi\|75211751\|ref\|ZP_00711815.1\| COG0546: Predicted phosphatases [Escherichia coli B171], gi\|194426923... gi\|238902476, gi... - gi\|238902476\|ref\|YP_002928272.1\| phosphoglycolate phosphatase [Escherichia coli BW2952], gi\|23886204... gi\|191167879, gi... - gi\|75228961\|ref\|ZP_00715553.1\| COG0546: Predicted phosphatases [Escherichia coli B7A], gi\|191167879\|... gi\|251786638, gi... - gi\|251786638\|ref\|YP_003000942.1\| hypothetical protein B21_03189 [Escherichia coli BL21], gi\|24237891... gi\|193061794, gi... - gi\|75260326\|ref\|ZP_00731594.1\| COG0546: Predicted phosphatases [Escherichia coli E22], gi\|193061794\|... gi\|253771788, gi... - gi\|254290063\|ref\|YP_003055811.1\| phosphoglycolate phosphatase [Escherichia coli BL21(DE3)], gi\|25397... gi\|89110625, gi\|... - gi\|89110625\|ref\|AP_004405.1\| phosphoglycolate phosphatase [Escherichia coli str. K-12 substr. W3110]... gi\|253975214, gi... - gi\|254163313\|ref\|YP_003046421.1\| phosphoglycolate phosphatase [Escherichia coli B str. REL606], gi\|2... GPH_ECOLI - Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP) - Escherichia coli gi\|170082902, gi... - gi\|170082902\|ref\|YP_001732222.1\| phosphoglycolate phosphatase [Escherichia coli str. K-12 substr. DH... EG11871 - phosphoglycolate phosphatase / Phosphoglycolate phosphatase; in dam operon; involved in degradation ...	149.0	[0..8]	[243..1]
gi\|75516147, gi\|... - gi\|75516147\|ref\|ZP_00738265.1\| COG0546: Predicted phosphatases [Escherichia coli 53638], gi\|18849334... gi\|157162861, gi... - gi\|75197316\|ref\|ZP_00707386.1\| COG0546: Predicted phosphatases [Escherichia coli HS], gi\|157162861\|r... gi\|226839055, gi... - gi\|254038549\|ref\|ZP_04872605.1\| phosphoglycolate phosphatase [Escherichia sp. 1_1_43], gi\|226839055\|... gi\|209756690, gi... - pir\|\|C91157 phosphoglycolate phosphatase [imported] - Escherichia coli (strain O157:H7, substrain R... gi\|254795299, gi... - gi\|254795299\|ref\|YP_003080136.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. TW14359... gi\|209397865, gi... - gi\|209397865\|ref\|YP_002272819.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4115]... gi\|15803888, gi\|... - gi\|15803888\|ref\|NP_289924.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 EDL933], gi\|1251... gi\|208741353, gi... - gi\|208821230\|ref\|ZP_03261550.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4042],... gi\|217325172, gi... - gi\|217325172\|ref\|ZP_03441256.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. TW14588]... gi\|124500814, gi... - gi\|124528159\|ref\|ZP_01699492.1\| phosphoglycolate phosphatase [Escherichia coli B], gi\|124500814\|gb\|E... gi\|168779465, gi... - gi\|189002264\|gb\|EDU71250.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4076], gi\|... gi\|168772727, gi... - gi\|187771456\|gb\|EDU35300.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4196], gi\|... gi\|168797152, gi... - gi\|189380127\|gb\|EDU98543.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC508], gi\|1... gi\|168785186, gi... - gi\|189374428\|gb\|EDU92844.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC869], gi\|1... gi\|195934873 - gi\|195934873\|ref\|ZP_03080255.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4024] GPH_ECO57 - Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph PE=3 SV=1 gi\|15833481, gi\|... - gi\|15833481\|ref\|NP_312254.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|170018379, gi... - gi\|170018379\|ref\|YP_001723333.1\| phosphoglycolate phosphatase [Escherichia coli ATCC 8739], gi\|16975... gi\|208814054, gi... - gi\|208814054\|ref\|ZP_03255383.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4045],... gi\|208727293, gi... - gi\|208807492\|ref\|ZP_03249829.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4206],... gi\|189359166, gi... - gi\|189359166\|gb\|EDU77585.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4401], gi\|... gi\|168751804, gi... - gi\|188014205\|gb\|EDU52327.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4113], gi\|... gi\|189364353, gi... - gi\|189364353\|gb\|EDU82772.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4486], gi\|... gi\|168759406, gi... - gi\|189369601\|gb\|EDU88017.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4501], gi\|...	149.0	[0..8]	[243..1]
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	149.0	[0..12]	[243..3]
gi\|115514777, gi... - gi\|117625653\|ref\|YP_858976.1\| phosphoglycolate phosphatase [Escherichia coli APEC O1], gi\|115514777\|... gi\|91212857, gi\|... - gi\|91212857\|ref\|YP_542843.1\| phosphoglycolate phosphatase [Escherichia coli UTI89], gi\|91074431\|gb\|A... GPH_ECOL6 - Phosphoglycolate phosphatase OS=Escherichia coli O6 GN=c4155 PE=3 SV=1 GPH_ECOL6 - Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=c4155... gi\|218367211, gi... - gi\|218560442\|ref\|YP_002393355.1\| phosphoglycolate phosphatase [Escherichia coli S88], gi\|218367211\|e... gi\|226902376, gi... - gi\|237703112\|ref\|ZP_04533593.1\| phosphoglycolate phosphatase [Escherichia sp. 3_2_53FAA], gi\|2269023... gi\|227883515, gi... - gi\|227883515\|ref\|ZP_04001320.1\| phosphoglycolate phosphatase [Escherichia coli 83972], gi\|227839394\|...	149.0	[0..8]	[243..1]
gi\|218362698, gi... - gi\|218555930\|ref\|YP_002388843.1\| phosphoglycolate phosphatase [Escherichia coli IAI1], gi\|218362698\|... gi\|192957860, gi... - gi\|75236986\|ref\|ZP_00721042.1\| COG0546: Predicted phosphatases [Escherichia coli E110019], gi\|193068...	148.0	[0..8]	[243..1]
gi\|191171581, gi... - gi\|75241525\|ref\|ZP_00725370.1\| COG0546: Predicted phosphatases [Escherichia coli F11], gi\|191171581\|... gi\|110345211, gi... - gi\|110643619\|ref\|YP_671349.1\| phosphoglycolate phosphatase [Escherichia coli 536], gi\|110345211\|gb\|A...	148.0	[0..8]	[243..1]
gi\|218434072, gi... - gi\|218706975\|ref\|YP_002414494.1\| phosphoglycolate phosphatase [Escherichia coli UMN026], gi\|21843407... gi\|218550641, gi... - gi\|218550641\|ref\|YP_002384432.1\| phosphoglycolate phosphatase [Escherichia fergusonii ATCC 35469], g... gi\|24053852, gi\|... - gi\|24114648\|ref\|NP_709158.1\| phosphoglycolate phosphatase [Shigella flexneri 2a str. 301], gi\|240538... GPH_SHIFL - Phosphoglycolate phosphatase OS=Shigella flexneri GN=SF3403 PE=3 SV=1 gi\|30065331, gi\|... - gi\|30065331\|ref\|NP_839502.1\| phosphoglycolate phosphatase [Shigella flexneri 2a str. 2457T], gi\|3004...	148.0	[0..8]	[243..1]

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Predicted Domain #1

Region A:
Residues: [1-246]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTSQFVAN LKRFRLVTFD VTDTLLRLED PLRQYHQTAE EFGVTGVDRR RLEQCFRQQF  60
   61 KAMSSEHPNF GRYSPGLDWQ RWWLQLVART FSCVDHGLAP EKLEKIGQRL ISVFRTSACW 120
  121 SHVNGAQELV QNVRNAGKCV GIISNFDSSL PQVLDAMGFA GKFDFILTSY EAGVMKPERG 180
  181 IFEIPLQRLQ IPAEQALHIG NKLDMDYEGA RNCGWSGLLV SNADNPHSFA SLSSLLEALK 240
  241 TQPIRW

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.154902
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
binding	0.660822867191303	bayes_pls_golite062009
hydrolase activity	0.194960782858734	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: