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View Structure Prediction Details

Protein: CG9806-PA
Organism: Drosophila melanogaster
Length: 911 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9806-PA.

Description E-value Query
Range
Subject
Range
gi|66512450 - gi|66512450|ref|XP_396261.2| PREDICTED: similar to CG14516-PA, isoform A isoform 1 [Apis mellifera]
721.0 [0..20] [902..87]

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Predicted Domain #1
Region A:
Residues: [1-911]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKLPWYLIV LHLCLPIGGT GATASNLRPL HYNLSLLTEV EPLKLSGNFS GEVIIRLRVW  60
   61 RETRTIILSN NGLQVGENVL LVRRNTGGRV TVRKMWQASS VHQLGIVFNS MLWLGEEYTL 120
  121 VVQFSGQLSR ASGYFVGGYM DSKHHPQWIA VTQLAPNLAN TVFPCFENRT FLAPFILNLA 180
  181 HPRGTNAVSN MRVLKTSDHE KDDYVWTTFQ QTPAMSVQKL AFSINRFTNR TSAEIPKGPA 240
  241 LTTWLRPKIA DQGDYAISIT PQIIVFFISL FGKPYPAMKI DQLVLPDTAY QSHEHLGLVS 300
  301 YPEAAFLYSA QRSTTRAKQQ VASHVAQEFA HHWLSDLENA ALYWLHNGLS DYVSGFAVDN 360
  361 VEPAWRFHEL SMVRQALAVL VEDSKSSAYP MSLAYASKSS DTQANQKSAL LFRMLHSLIG 420
  421 TQAFLNALRL YLQRSHKGSS SNQAFLWHTL QEESDNQMSL RQDIKVSQLM DSWTMQPGYP 480
  481 LIRVVRNYDT NEVTVTQERF LRNPGKLMQK RQQCWWVPLT FATAGIDSFV STLPSEWLTC 540
  541 QGRQTASPLI LNEVAQPDKW VVFNLRLATP CRITYDERNW QLIGNALSGT NASSIDRFTR 600
  601 AQLISDVLNL AGAGVVTYDL ALNFLGHLRN EDEFIVWQAA DTYLEWLHRT LRQTTIISTF 660
  661 KGFMRDLLQT KFDELFKRDG SAAENANITE LMVIVLQLSC RTDLESCADF ALKEFAGLTL 720
  721 ETNRIPVDLS ETIYCTAIQF GTEADWTLLR RLYTRSNVSE ERRILLSAMA CSRENWALDK 780
  781 LLNLAFAGRY MPKDDVLLIF SAVAQNPLGY NIAKKYLVDN IKAIIKLYGS NTDELAQLVT 840
  841 VLMKEVTTEE ELNALRMFMR TDLQNLPGFE IAFRRILELG EDNISWHNRQ YHNLLAAVCN 900
  901 ITGSIEPQCI Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 150.0
Match: 2hpoA
Description: No description for 2hpoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle