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View Structure Prediction Details

Protein: bif-PB
Organism: Drosophila melanogaster
Length: 1235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bif-PB.

Description E-value Query
Range
Subject
Range
gi|14334990 - gi|14334990|gb|AAK59373.1| protein phosphatase 1-binding protein Bifocal [Drosophila melanogaster]
485.0 [0..1] [1235..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQKRPSLD LHTDVPAGLA AGGSGLGAAA EMSPTSGFLP DMPQWKKDLI QRRKTNVART  60
   61 QAASITSPTD GSCGALAEAN AAPGAIADFT EPATISSTSQ KRNMIGSEEK SEKSSISNTN 120
  121 SDSTGGHHSV VAVSLSPDAA ATTNVTVTPI PKQRSSLLNT RSQEREMVRY ILSESGERDG 180
  181 ELESGEQPAG VVSNSRCGEV ETGTIGSPSS SANQNPNPNH LKTKCKPGQS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [231-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAEGKPSAKE TIVDNSKSCS KTKSISDKLQ SNKFIIQQQQ QQQQQQQQQQ QLSPTKVTVK  60
   61 PTMVAMQEMK KTTKQNGQHR HLAGKIGSVA GGDVDPQHPP TNPIPDSLDT GEDLSYGPGI 120
  121 VSKLRCRYLS LALRESRQQS SKQRLQRSTS LNTLLDRDDD EVEVEEPEMT NSQVRAKSTP 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [411-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPILGAKPTP KPSSQHQRPV SLGANGAGSA VNPPSNSDQA QTGAVANGGA GSGQRSRHFK  60
   61 RGNEVMKRAR SVEALLCEKS PWNSQRISTA GAAAAAAPSP PAPKATAAAP SPVTSPTCVT 120
  121 IEDKIHNARE RLHSGTDTAP PKRLTS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [557-805]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIDDTERPPP DLVKQTLKMF EASANRRPRA AHRSNGVGGV ASKVANYKSI IKDQKQPSSA  60
   61 AATPPPTGMG FASSTPLRHV HPDIIPRQVD SPVSALSVMM RRMELQEPET PERETRDAEA 120
  121 TPQSEALSET ERNDRDEGDG EVDDDNHNNN DDDHDDGDDG SDNNEQRDKM GAAAAGDKPK 180
  181 PPAESAAGGA QRSFAASTEN AHVASGSSSS TSASVRKLSN NNDSSSGPAV TKQIGVIRPL 240
  241 FNSQGAGST

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [806-935]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLTSREIEKN RINEMKKSTA TDAGGSVSGS GTVAGAGSGT SPTTSLDSVI NTKEAASSET  60
   61 DASASPLWTL RKLRNQSQTA GGGSGPSSSL HSTENTSMVF NFSKSTKEVP DYIESDVVIY 120
  121 RRKRELPKPN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [936-1020]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPGFVLLGDL SVETSTDTDY DDYSMCPPSP CDVEFENANI VIDGKSSIRQ KPKESSFRVQ  60
   61 FNDTLTSTFE YPSEASMTIE DPPYA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1021-1159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPFGHVSKHH QMLLAEQMHL LQHQEQLELE QMHQLGLAPE QHHHVTVDEI IELPTSTAGH  60
   61 GHGIGLGHRS GAAGGGGTML GNLPLGSTAL GFYTPMKGTA MDNLFQLGVT RYALPESSSS 120
  121 GSSNGSHSPG SNGSSPAGA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1160-1235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGSRLMFNGN GSIMGIGEGL IKEGDLAATE AGPGTADGAG ASKKGSAVDE DDYHLTATPG  60
   61 AEVVYSEGTQ KTDLLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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