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View Structure Prediction Details

Protein: CG10352-PA
Organism: Drosophila melanogaster
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10352-PA.

Description E-value Query
Range
Subject
Range
gi|37362312, gi|... - gi|47086593|ref|NP_997891.1| hypothetical protein LOC792824 [Danio rerio], gi|37362312|gb|AAQ91284.1...
gi|187608693, gi... - gi|187608693|ref|NP_001120188.1| hypothetical protein LOC100145229 [Xenopus (Silurana) tropicalis], ...
191.0 [0..2] [309..1]

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Predicted Domain #1
Region A:
Residues: [1-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLTHSIWF SAIAMASLFH LYLHYIWSYV GLVPPGVVWY PLRDFIPGSA EALAHLAHLG  60
   61 KDVTFVTNNS ISSVKEHIEK FEKQGHLKID EHQIVHPAQT ICDHLRSIKF EGLIYCLATS 120
  121 PFKEILVNAG FRLAQENGSG IITRLKDLHE AIFSGESVDA VIIDVDFNLS AAKLMRAHFQ 180
  181 LQNPKCLFLA GAADALIPFG KGEIIGPGAF IDVVTQAVGR QPITLGKPGE DLRKLLLERH 240
  241 REIPPSRVLF VGDSLASDIG FARASGYQTL LVLTGGTKLE DVQRLPIDHS QMPDYLADCL 300
  301 GQIAINNNPA SSNSDSAHSV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 1zjjA
Description: No description for 1zjjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle