| Protein: | CG42251-PD |
| Organism: | Drosophila melanogaster |
| Length: | 1416 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG42251-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
500.0 | [0..4] | [997..1910] |
|
Region A: Residues: [1-327] |
1 11 21 31 41 51
| | | | | |
1 MPLSFLFRPF FISVLPAIRT KQLPFGEAQQ ALQLQPAAAA ATAAATTSAA AAANATAAAP 60
61 QLPPPLPVPV ATLPNQAATA AAAATAAILA THQQQQQQQH QHLSNNNNNG GSTHGQQHTH 120
121 SNNNNTLPVG AQQQQQQQHQ QQRATLQHPP LPNSNIKQAS VKLIEGYSDP KDTRNHKKVY 180
181 HKKAKKRSTT GHKRHQQQQQ QQQPHQQQLQ QQQQQTLPTP RSAQQQQQLQ QKLQQRHSTY 240
241 NNNNGNSRKD KRNSQYNSDS SAPKSSDDEA DIDEEVEQQP LPVPQAPVQS ASQPAAGLNS 300
301 PDSISDDLVR PLPPQLQRSP RKLTVAP
|
| Detection Method: |  |
| Confidence: | 13.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [328-581] |
1 11 21 31 41 51
| | | | | |
1 AEHNKRQPSP YYYSDLLKSR DKDKDKDKDK DKDKDKDKDK DKDKDKERDK DREDFKLKCR 60
61 QSTASEPPQQ TQTQLGGYRK SSSLDVPPAE EQPEAESHEE EDPRTGQDSQ STPKRYSFTE 120
121 EGVHIIRCET PSTSTSEESD CSECLKRREW HARALALVRK TCNVQPRNQN PTGSELQLQL 180
181 QHCDAGEGEL LKCCPPPPAP AENQSQVQPM PPHRLLGPAA VCGACITSAP ASSLAGGRGS 240
241 ELGDDLEEEY FRPR
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [582-801] |
1 11 21 31 41 51
| | | | | |
1 SIFYVHPHGV HECIECAQPA QPATVPAPTL SNPSLDIYGD DEDEVDGDED EDEEDDSEDI 60
61 MGSRRRQIYE TAFDCKIAKS DDDLDEVDRI TNCSVLLQLS NGNGGDISKV TGSSKTRAEC 120
121 KRAKNSKNQA LQEQTGEAHV QVHHVEAELG KLQLSQVDQQ NQNQNQSQNQ QHGVSATGSG 180
181 ASASSTQQLP VRGYTPSPPS TAPLPMKFPG KHDRYLNMNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [802-920] |
1 11 21 31 41 51
| | | | | |
1 IRSAPNLPAA NPAHPRLRDL RLPIQSMRHQ CGGSSNDNSL TDSAYVNPPS TNSNSNAASA 60
61 SASASVSATG SAAPRRPRSF VLESGRVLEL RRSAQGHQGG QSTHHHHHHH HHAPGSRRN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [921-1094] |
1 11 21 31 41 51
| | | | | |
1 RHGQSQGQTT GGGHNYSSTE SIATSSSGGS MESLRSSTSE GNRSTSSSES RHSSSLSSHS 60
61 SESGSGGSGG SGGSSVAYPL RPAPLLLHSK LHILSPISDK SSQEPASASA SEQSQQPSQQ 120
121 LAPMASQEDD STTSGAPAGN QVQVNASLKQ PRSNRGAPNK ALLQLADELL GSDS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1095-1175] |
1 11 21 31 41 51
| | | | | |
1 GISLHSREDG KPQALALQRL TLPKLQLIGA EGTTTSATAS GAGGSSATGG SSGAGGSGSG 60
61 SVVASGSTGI QQDLRDLPFD M
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1176-1416] |
1 11 21 31 41 51
| | | | | |
1 PKLRRRKTLQ QEAACTSGSA TSVDLGELPF DMPKLRRRLR ANQAEINNLL MHSTESSGIS 60
61 QASSSHSMRD DQKMSSKLDT ALFRQNLTLN LNESRQATKQ FGSLDLRGLN SNKELNMNLS 120
121 QGYVTAVDLI DVTIPLERQG WYHGAITRIE AETTLRPLSE GSFLVRNCES TKQDYSLSLK 180
181 GAKGFMHMRI QRNETGQYIL GQFSRPFETV PEMIRHFCLN RLPVRGAEHM CLIEPVIAQL 240
241 L
|
| Detection Method: | |
| Confidence: | 45.045757 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
| Term | Confidence | Notes |
| binding | 0.434026084000615 | bayes_pls_golite062009 |
| protein binding | 0.31534665043077 | bayes_pls_golite062009 |
