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View Structure Prediction Details

Protein: CG6299-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 205 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6299-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|109497489 - gi|109497489|ref|XP_001080376.1| PREDICTED: similar to Glycolipid transfer protein (GLTP) [Rattus no...
220.0 [0..9] [205..131]
gi|75765252 - gi|75765252|pdb|1TFJ|A Chain A, Crystal Structure Of Bovine Glycolipid Transfer Protein In Complex W...
216.0 [0..9] [205..12]
gi|109099519 - gi|109099519|ref|XP_001089145.1| PREDICTED: glycolipid transfer protein isoform 2 [Macaca mulatta]
GLTP_PANTR - Glycolipid transfer protein OS=Pan troglodytes GN=GLTP PE=2 SV=1
GLTP - glycolipid transfer protein
CCDS9136.1_1 - null
ENSCJAT00000018919 - null
214.0 [0..9] [205..2]
gi|73995333 - gi|73995333|ref|XP_854394.1| PREDICTED: similar to Glycolipid transfer protein (GLTP) [Canis familia...
213.0 [0..9] [205..2]
GLTP_MOUSE - Glycolipid transfer protein OS=Mus musculus GN=Gltp PE=1 SV=3
209.0 [0..9] [205..2]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASEGSAAR IQFKALRGFP AIGDTADKLE TQAFLDASKE IVTVIESFGK LFTPVISDMN  60
   61 GNINKLTKAY GADVVKYQYL EDLIVLNVNV DDFAANALLW LKRGLQLICT FFENIYNDAQ 120
  121 AKEALKQHLQ DAYERTLKPY HGFIVQSTIK IIYSWVPTRS QLLGQGVAQA ENIEVLTSFL 180
  181 PRMRAHLDSI DALLKAHNLD DARKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.39794
Match: 1tfjA
Description: Crystal structure of Bovine Glycolipid transfer protein in complex with a fatty acid
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle