| Protein: | Stim-PA |
| Organism: | Drosophila melanogaster |
| Length: | 570 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Stim-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..122] | [564..136] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MRKNTIWNYS LIFFCCVLKS ISTLDHGPHT VSVDSNRHNT QHQYKQNPNV ASQRHSSHES 60
61 GQSLHNSQSE HVTHIAASHA GSGGEHSTHL AQNLHRSSYN LLSEAMSQAV SNEFSSMGSG 120
121 SADGACAADD FDC
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [134-474] |
1 11 21 31 41 51
| | | | | |
1 YSGSVQDRFG MEAIASLHRQ LDDDDNGNID LSESDDFLRE ELKYDSGYEK RQKAFHFNDD 60
61 MHISVKELWE AWLRSEVHNW TIEQTTDWLA QSVQLPQYVD LFKLHKVTGA ALPRLAVNNL 120
121 QYVGNVLGIK DPIHKQKISL KAMDVVLFGP PRETGTRWKD YILVTLLLSA IIGCWYAYQQ 180
181 NKNAKRHLRR MAQDMEGLQR AEQSLQEMQK ELERARMEQE NVATEKLDLE RRLKEAPTLS 240
241 SSNSDLEVQQ LKKEIEMLRN ELSRAEFELV DNCWSPPPQL QSWLQYTYEL ESKNHQKKRT 300
301 SAEKQLQSAR EACEKLRKKR SSLVGAFVST HGKSIDDVDR S
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [475-570] |
1 11 21 31 41 51
| | | | | |
1 IVEARNALGD VTNELQERLH RWKQIETCLG LNIVNNNGLP YLENVLYGRN GGLQSSMGMS 60
61 STKGSRARIT NSTEDLDDES IQGKLNFENF SLLATE
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
