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View Structure Prediction Details

Protein: CG8051-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 616 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8051-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|70725707, gi|... - gi|70725707|ref|YP_252621.1| hypothetical protein SH0706 [Staphylococcus haemolyticus JCSC1435], gi|...
207.0 [0..3] [497..90]

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Predicted Domain #1
Region A:
Residues: [1-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDNGNNHNN NNNNNNDEAL RLRLPEEQAE QLLPKNGSAG QTKIAPPTHT HSIAAASVPQ  60
   61 KVPAKKKRDK SDLGEDFVAP DGGWGWLVSV ASGVNILVTF ALAQQFGILF RDRMAGLGIS 120
  121 SSELTTIINT QIAVSAFTGL LNGPLFRRYT YRVVALVGSV LTFLGLFWMV FADTFAVYIM 180
  181 SFSILYGFGR GLTVSASSLA VNTYFKVKRR TATAFQFGVA GLGPIVCPYF ATYMLYEFGV 240
  241 QGTTLLFAGA SLHTIACSLI YQPVKWHVVK RDRDAEALQQ VQPLAEREDQ DEDIIKNVVE 300
  301 PETPVLPRAN DGWFGSRASL NSVGTRNRLN TWEKSDSNGH VELKRLSSKD SNPGRQLRSI 360
  361 SVSHSIKEEE ATGYNSDHEV QHTELTEKEK QELEDEKERQ RRKKLPFYMK VVIFFDMDLL 420
  421 RDITYVNLAV GITLINFVEI NFAILTPFIL SDLGFNKDQI ALAMSTLGFF DLVVRFLIPL 480
  481 ITAKINLSNR TFFVVGIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [499-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMCIGRMFLS MTSNFYVMMA IFLWLGLNKA FRTVFWSLII PSYVPLKRLP AAAGLQLLMS  60
   61 GTFSMIFGPL IGLIRDHTSY AVTLNLLNAL CVMAFAGWYL EDFIRARSRK SPPVKSIN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.47
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle