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View Structure Prediction Details

Protein: FBpp0311838, CG1...
Organism: Drosophila melanogaster
Length: 713 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311838, CG1....

Description E-value Query
Range
Subject
Range
gi|109109328 - gi|109109328|ref|XP_001108240.1| PREDICTED: similar to integral membrane protein 1 [Macaca mulatta]
546.0 [0..6] [713..121]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLDVGGVAR GLLTWDKQEH LVKLAILILA AVLSFATRLF SVLRFESVIH EFDPYFNYRT  60
   61 TRFLAEQGFY KFHNWFDDRA WYPLGRIIGG TIYPGLMLTS AALYRLMWLL N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTIDIRNVCV FLAPFFSSLT TLVTYALTKE IHSTGAGLVA AALISIVPGY ISRSVAGSYD  60
   61 NEGIAIFCML FTYYLWIKAV KTGTIFWSAM SALAYFYMVS SWGGYVFLIN LIPLHVLALM 120
  121 ITGRFSHRIY IAYSTLYCVG TILSMQISFV GFQPIQSSEH MLALGTFGLC QIHAFVDYLR 180
  181 SRI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [295-570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKDHFDLLFK TLVSSVLTVV FVVGTLLTLT GKVSPWTGRF YSLLDPSYAK NHIPIIASVS  60
   61 EHQPTSWSSF YFDLQILVFL FPAGLYFCFS KLTDSNIFII LYGVTSIYFA GVMVRLMLVL 120
  121 APVMCVLSGI AISHLLAKYI KSVDAGSSSK QGVESKRQHK KLEQQTGGVK SEVAIGFVGV 180
  181 ITLMLIVYTL HCTWVTSEAY SSPSIVLSAR SHDGGRIIFD DFREAYYWLQ MNTPEDARIM 240
  241 SWWDYGYQIT AMANRTILVD NNTWNNTHIS RVGQAM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [571-713]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASSEEKAYEI MRELDVDYVL VIFGGLTGYS SDDINKFLWM VRIGGSTDRG AHIREKDYYA  60
   61 ANGEFRVDKE GSPTLLNCLM YKMCYYRFGQ MYTEGGKAQG YDRVRAAEIG NKDFELDVME 120
  121 EAYTTEHWLV RIYKVKDLPN RGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle