Protein: | DIP1-PC |
Organism: | Drosophila melanogaster |
Length: | 395 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIP1-PC.
Description | E-value | Query Range |
Subject Range |
|
275.0 | [0..1] | [395..1] |
Region A: Residues: [1-138] |
1 11 21 31 41 51 | | | | | | 1 MKRNRRAFAG NNKPFVFGGI YAANVQEQQS SPVALYPTSA SPVAVQSPQD AFLAVQSPGA 60 61 PAPVQLANSS DQQNNPDADA IASKLPMPVI IKEEPISVND EPSVDNIEDN TSASTSASGI 120 121 GGKIPFKKIF QKRKKSSE |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [139-257] |
1 11 21 31 41 51 | | | | | | 1 RTRDKKLRQN RQLRKSMLPK NALMALNEVK GVTISDFTID SNTDGGFTAV VTVNSNQYEG 60 61 KGTSKMTAKN AACEKAWRDF IIAKMTPKPP RIHQVEMGSE PMDINEDEAD APDDDLPML |
Detection Method: | |
Confidence: | 7.0 |
Match: | 1whqA |
Description: | Solution structure of the N-terminal dsRBD from hypothetical protein BAB28848 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.94193673826237 | bayes_pls_golite062009 |
nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
protein binding | 0.32114973384806 | bayes_pls_golite062009 |
Region A: Residues: [258-395] |
1 11 21 31 41 51 | | | | | | 1 NLASFAIYKL FAEWEREGYV VPEMHPSANA AQQAGGDAGT PVPPVPKEPK KPPVRTELPS 60 61 GWETMHPATI LCIMRPGLNY VDYGSSGDKT NGMQHLGIMV DNQEFHANGR SKKIARRNVA 120 121 VKVCNSLFGT NFTYSDTT |
Detection Method: | |
Confidence: | 15.522879 |
Match: | 1o0wA |
Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.94193673826237 | bayes_pls_golite062009 |
nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
protein binding | 0.32114973384806 | bayes_pls_golite062009 |