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View Structure Prediction Details

Protein: CG14619-PA, CG14...
Organism: Drosophila melanogaster
Length: 856 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14619-PA, CG14....

Description E-value Query
Range
Subject
Range
gi|115497674, gi... - gi|115497674|ref|NP_001069594.1| ubiquitin specific peptidase 8 [Bos taurus], gi|113911783|gb|AAI225...
429.0 [0..212] [853..431]

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Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVIAPRRSS TSAAGSGSLY GTSAVGTSSG STTSSNSTSG SHHISITGSG AVDRTSGGAA  60
   61 TNGYSRISSS YDRGSSLSKW LPTSSGGSNS SGYGSSYYPT SYSTFSANSG SSSASYAPRS 120
  121 SVQRSSVGTT SSTSYMSGGS GSSSSAYRTS SYLSGSSYDS PTYSRYGLPR KAASRITTNG 180
  181 DSLSGSAKRE DYGLRRGHDT VKKPPISGGS VGHNCSSSTA SRDTKAVDGN KRLSSSSSSP 240
  241 SLARLVATSG LDIYEKYSPA NYKPNCELSR SRSGHSETDL ENGSNKETTP TCTVTLDRPW 300
  301 SSTSRYSRLY RNSSDAGGDS SASAKKLGSG KYSISSSSSS GDVPTATFTL RSKRTRRNQA 360
  361 EEVPTSTGVE QAGPAAPPPT PPPPPPPPPP TNGHKPAESN GGLEAKLNGL SLLSTSPKRN 420
  421 AIYERNQETA DDAGVSQDTA DNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #2
Region A:
Residues: [444-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVSTSATFKL NDSSKTLARS GTGSSSTARS VLPPMTPTSS RYWDRDSGTS RSSIGTSSAL  60
   61 NSSSLKHNSD DGYKTASSSR DEKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [528-856]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGLCGLRNIG NTCFMNSVIQ CLSHTQELTR FLRSHHGSRS LSTKDQQILH EFAKLIQEMW  60
   61 TANVHTVTPM ELKRAFSTKH RMYSDYNQQD AQEFLRFFLD SLHSALNSGV KGETLNIDDN 120
  121 LSDNKKADLT WEWYTRHENS LVRDLFVGQL KSTLKCTTCG NTSVTFDPFW DLSVPLPSSS 180
  181 RCKLEACLDL FIREEVLDGD EMPTCAKCKT RRKCTKSFTI QRFPKYLVIH LKRFSETRWS 240
  241 KLSNIVEFPT SDSELNMGSY GANSNSNVHY SLYAISNHMG STAGGHYVAL CKHPVSRKWH 300
  301 EFNDNIVSDA LSENHLVSSS AYILFYERT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2hd5A
Description: No description for 2hd5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle