| Protein: | pab1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 463 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pab1.
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..5] | [463..1193] |
|
|
360.0 | [0..5] | [463..1065] |
|
|
359.0 | [0..4] | [463..627] |
|
|
358.0 | [0..5] | [463..1053] |
|
|
348.0 | [0..5] | [462..711] |
|
Region A: Residues: [1-463] |
1 11 21 31 41 51
| | | | | |
1 MDDIEDSLDQ WKFAQCFGDK GDVEDITEAD IISAVEFDHT GDYLATGDKG GRVVLFERNH 60
61 SKKGCEYKFF TEFQSHEPEF DYLKSLEIEE KINKIRWCKR TNRAHFLLST NDKTIKLWKL 120
121 YEKNLKVVAE NNLSDSFHSP MQGPLTTPSQ LRLPRLNHHD MIIAAYPRRV YANAHAYHIN 180
181 SISVNSDAET YISADDLRIN LWNLSISDHS FNIVDIKPEN MEELTEVITS AEFHPINCNH 240
241 LMYSSSKGNI KLLDLRQSAL CDNPCKLFED QEDQDSKSFF SEIISSISDV KFSQNGRYIL 300
301 SRDYLTLKIW DVNMEKAPVK TIPLHDVLRS KLCDLYENDC IFDKFECTFS GDDKHVLSGS 360
361 YSNNFGIYPT DSSLPGDRGQ IVLQADKAAF RARKSAANNV PKLNAVKNND WRSQPQAAMG 420
421 SASVGLDPDN LDYNKKILHA SWHPFEDSVA IAATNNLFVF SKL
|
| Detection Method: |  |
| Confidence: | 39.09691 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| actin binding | 2.27900251096697 | bayes_pls_golite062009 |
| hydrolase activity | 1.72636554646684 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| nucleic acid binding | 0.693814013902061 | bayes_pls_golite062009 |
| transcription regulator activity | 0.579815310385678 | bayes_pls_golite062009 |
| actin filament binding | 0.554537899540618 | bayes_pls_golite062009 |
| kinase activity | 0.498626428956965 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.496422970081867 | bayes_pls_golite062009 |
| snoRNA binding | 0.347797037104681 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.326899344050856 | bayes_pls_golite062009 |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| protein kinase activity | 0.245792286293244 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| DNA binding | 0.0736878329528894 | bayes_pls_golite062009 |
| 0.0248988265652406 | bayes_pls_golite062009 |
