| Protein: | SPAC13G7.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC13G7.05.
| Description | E-value | Query Range |
Subject Range |
|
|
514.0 | [0..12] | [536..36] |
|
|
510.0 | [0..12] | [536..36] |
|
|
505.0 | [0..32] | [537..149] |
|
|
491.0 | [0..12] | [536..35] |
|
|
485.0 | [0..32] | [537..157] |
|
|
477.0 | [0..39] | [529..31] |
|
|
476.0 | [0..6] | [537..39] |
|
|
476.0 | [0..11] | [534..50] |
|
|
474.0 | [0..42] | [537..149] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MTDTPRILIT PSPLSDISTT INKPNVHPSM SLLKALPECR LVVKSKGDKN NANVVEFPLD 60
61 RHKQLLIAGK VYHDYKFKPR KSIFDRVTDP NYFAKSEFRG FYVLFWLSMA AWVLQLYARS 120
121 YWQR
|
| Detection Method: |  |
| Confidence: | 0.985 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [125-250] |
1 11 21 31 41 51
| | | | | |
1 DTLLGLPLAR QVFRQFFVLF SSDFLMICLS FFSYGLQVCI EKNMIRWANL GYTIQTLWQG 60
61 FYMVLAVYWV KHRDFPIVQC VFFTLHCAVL IMKQFSYSHH MGYISEIRIL HNEYEKLLKF 120
121 VRECLN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [251-329] |
1 11 21 31 41 51
| | | | | |
1 STEKDEKYTF ELTFPNKPAE TISTLQAEEI VALTAKYLSR QMRSEVGNVV YPDNINFFNY 60
61 VDYLLVPSLV YSMEFPRVA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.754 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.605 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.604 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.586 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.574 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [330-425] |
1 11 21 31 41 51
| | | | | |
1 HFRWHYMAFK AGSTFGLLAL TLALVDWYFV PSAVAVKDLD FIGKLRIAPL LMNKIMFPAI 60
61 ILYLIMFYLI FDCILNAFAE ITKFADRGFY GAWWNT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [426-537] |
1 11 21 31 41 51
| | | | | |
1 VTWDEFSREW NKPVHVFLMR HVYHSSISGF KLKKSHAVLL TFLISALVHE FVMLLATGKF 60
61 RCYILTFQLL QIPLYDLQQM FAFKKRDILG NVFFWIGMFT GPSFLCILYI VF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.782 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.709 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.626 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.601 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.567 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
