Protein: | gar2 |
Organism: | Schizosaccharomyces pombe |
Length: | 500 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gar2.
Description | E-value | Query Range |
Subject Range |
|
280.0 | [0..77] | [496..8] |
Region A: Residues: [1-119] |
1 11 21 31 41 51 | | | | | | 1 MAKKDKTSVK KSVKETASKK GAIEKPSKSK KITKEAAKEI AKQSSKTDVS PKKSKKEAKR 60 61 ASSPEPSKKS VKKQKKSKKK EESSSESESE SSSSESESSS SESESSSSES ESSSSESSS |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [120-257] |
1 11 21 31 41 51 | | | | | | 1 SESEEEVIVK TEEKKESSSE SSSSSESEEE EEAVVKIEEK KESSSDSSSE SSSSESESES 60 61 SSSESEEEEE VVEKTEEKKE GSSESSSDSE SSSDSSSESG DSDSSSDSES ESSSEDEKKR 120 121 KAEPASEERP AKITKPSQ |
Detection Method: | ![]() |
Confidence: | 1.04 |
Match: | 2j63A |
Description: | No description for 2j63A was found. |
Region A: Residues: [258-500] |
1 11 21 31 41 51 | | | | | | 1 DSNETCTVFV GRLSWNVDDQ WLGQEFEEYG TIVGARVIMD GQSGRSKGYG YVDFETPEAA 60 61 KAAVAANGTK EIDGRMVNLD LSNPRPANPQ PYAQQRAGNF GDQLSEPSDT VFVGNLSFNA 120 121 TEDDLSTAFG GCGDIQSIRL PTDPQSGRLK GFGYVTFSDI DSAKKCVEMN GHFIAGRPCR 180 181 LDFSTPRTGG GSRGGRGGFG GRGGFGGRGG FGGGRGRGRG GARSGNPNRG SVAPFSGNKV 240 241 TFD |
Detection Method: | ![]() |
Confidence: | 36.522879 |
Match: | 1pgzA |
Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 0.950788308762215 | bayes_pls_golite062009 |
nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |