| Protein: | SPBC14C8.13 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 251 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC14C8.13.
| Description | E-value | Query Range |
Subject Range |
|
|
260.0 | [0..14] | [238..29] |
|
|
257.0 | [0..14] | [232..46] |
|
|
236.0 | [0..9] | [233..37] |
|
|
235.0 | [0..2] | [231..7] |
|
|
234.0 | [0..22] | [238..91] |
|
|
232.0 | [0..22] | [233..48] |
|
|
218.0 | [0..72] | [238..73] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MDFIVVKRSR KKKNGRGKFP KVSNTITQGD TDLWSQDTLQ RKLDNSREKL EYSEFLKSVQ 60
61 SQLSEFKDPI HKCIILGLGR IH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.621 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.596 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.591 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.542 | a.29.10 | Description not found. |
| View | Download | 0.537 | a.59.1 | PAH2 domain |
| View | Download | 0.530 | a.4.1 | Homeodomain-like |
| View | Download | 0.472 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.455 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.420 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.414 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
|
Region A: Residues: [83-181] |
1 11 21 31 41 51
| | | | | |
1 TLTASLQLSL FFEIMKIFNL QPRFCSFYDP AFLKDDVEFL ENKGFCVLPD PPTPSCLKYT 60
61 LLYMPHCPTS LYETWLAAYV NDDPRHFIMC GNNLQLYVD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.597 | N/A | N/A | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.536 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.504 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.490 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.413 | N/A | N/A | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.398 | N/A | N/A | d.220.1 | Metal cation-transporting ATPase, ATP-binding domain N |
| View | Download | 0.365 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.363 | N/A | N/A | a.28.1 | ACP-like |
|
Region A: Residues: [182-251] |
1 11 21 31 41 51
| | | | | |
1 NKPSKEIVST YPNVYKMCTK NYYTRLLFPE FPNVYAFNDL SFHFHDAQSF VEKKQPSKFV 60
61 DASSVAEHPS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.783 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.783 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.450 | N/A | N/A | a.217.1 | Description not found. |
| View | Download | 0.426 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.394 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.394 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.386 | N/A | N/A | d.37.1 | CBS-domain |
| View | Download | 0.341 | N/A | N/A | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.305 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.297 | N/A | N/A | a.76.1 | Iron-dependent represor protein, dimerization domain |
