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View Structure Prediction Details

Protein: hsr1
Organism: Schizosaccharomyces pombe
Length: 582 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hsr1.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
421.0 [0..87] [579..2383]
gi|76678552 - gi|76678552|ref|XP_583095.2| PREDICTED: similar to Zinc finger protein 268 (Zinc finger protein HZF3...
399.0 [0..14] [579..653]
gi|109458486 - gi|109458486|ref|XP_218463.4| PREDICTED: similar to zinc finger protein 69 [Rattus norvegicus]
394.0 [0..15] [580..568]
gi|47271360, gi|... - gi|47271360|ref|NP_065838.1| zinc finger protein 624 [Homo sapiens], gi|47077259|dbj|BAD18548.1| unn...
388.0 [0..27] [580..273]
gi|109125970 - gi|109125970|ref|XP_001115785.1| PREDICTED: similar to zinc finger protein 665 [Macaca mulatta]
385.0 [0..97] [579..250]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFFPEAMPL VTLSERMVPQ VNTSPFAPAQ SSSPLPSNSC REYSLPSHPS THNSSVAYVD  60
   61 SQDNKPPLVS TLHFSLAPSL SPSSAQSHNT ALITEPLTSF IGGTSQYPSA SFSTSQHPSQ 120
  121 VYNDGSTLNS NNTTQQLNNN NGFQPPPQNP GISKSRIAQY HQPSQTYDDT VDSSFYDWYK 180
  181 AGAQHNLAPP QSSHTEASQG YMYSTNTAHD AT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [213-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIPSSFNFYN TQASTAPNPQ EINYQWSHEY RPHTQYQNNL LRAQPNVNCE NFPTTVPNYP  60
   61 FQQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [276-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSYNPNALVP SYTTLVSQLP PSPCLTVSSG PLSTASSIPS NCSCPSVKSS GPSYHAEQEV  60
   61 NVNSYNGGIP STSYNDTPQQ SVTGSYNSGE TMSTYLNQTN TSGRSPNSME ATEQIGTIGT 120
  121 DGSMKRRKRR QPSNRKTSVP RSPGGKSFVC PECSKKFKRS EHLRRHIRSL HTSEKPFVCI 180
  181 CGKRFSRRDN LRQHERLHVN ASPRLACFFQ PSGYYSSGAP GAPVQPQKPI EDLNKIPINQ 240
  241 GMDSSQIENT NLMLSSQRPL SQQIVPEIAA YPNSIRPELL SKLPVQTPNQ KMPLMNPMHQ 300
  301 YQPYPSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2i13A
Description: No description for 2i13A was found.

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Created and Maintained by: Michael Riffle