Protein: | SPCC584.15c |
Organism: | Schizosaccharomyces pombe |
Length: | 594 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC584.15c.
Description | E-value | Query Range |
Subject Range |
|
203.0 | [0..9] | [592..12] |
|
200.0 | [0..11] | [423..27] |
|
200.0 | [0..11] | [423..43] |
|
194.0 | [0..11] | [423..4] |
|
191.0 | [0..11] | [423..4] |
|
191.0 | [0..11] | [423..4] |
|
190.0 | [0..10] | [342..11] |
Region A: Residues: [1-348] |
1 11 21 31 41 51 | | | | | | 1 MNKIKGGRHK SPVKLFEVRL YNAEANVIVL YGNSMDTSAR LSGIVVLSVS SPIRVKNIKL 60 61 RLSGRSFVCW ADESRHASPG NRIRRQVVQI LDKSWSFLAP NESAKVIDQG NYEYPFYYEL 120 121 PPDIPDSIEG IPGCHIIYTL TASLERATQP PTNLETALQF RVIRTIPPNS LDLMHSVSVS 180 181 DIWPLKVNYE TSIPSKVYAI GSEIPVNITL YPLLKGLDVG KVTLVLKEYC TLFITSKAYS 240 241 STCRKEFKRA LVKKTIPGLP MVDDYWQDQI MVKIPDSLGE CTQDCDLNCI RVHHKLRLSI 300 301 SLLNPDGHVS ELRNSLPLSL VISPVMFGAR PTEGVFTGDH NSYVNENI |
Detection Method: | ![]() |
Confidence: | 48.0 |
Match: | 1jsyA |
Description: | Arrestin |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 2.01555579124143 | bayes_pls_golite062009 |
protein binding | 1.50286160643298 | bayes_pls_golite062009 |
ligand-gated ion channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
ligand-gated channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
cation channel activity | 0.0318083563912285 | bayes_pls_golite062009 |
Region A: Residues: [349-458] |
1 11 21 31 41 51 | | | | | | 1 LPSYDKHVFD VLWDGIPSEN PQLQSGFTTP NLSRRNSSDF GPNSPVNIHS NPVPISGQQP 60 61 SSPASNSNAN FFFGSSPQSM SSEQTDMMSP ITSPLAPFSG VTRRAARTRA |
Detection Method: | ![]() |
Confidence: | 0.961 |
Match: | 1pk8A |
Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [459-594] |
1 11 21 31 41 51 | | | | | | 1 NSASSVFNSQ LQPLQTDLLS PLPSPTSSNS RLPRVRSACT LNVQELSKIP PYYEAHSAFT 60 61 NVLPLDGLPR YEEATRPSSP TESVEIPSNT TTIAPSPVPT IIAPALPSTP APPLPSHPMA 120 121 TRKSLSSTNL VRRGVR |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.