YRC Public Data Repository - Protein Structure Prediction

Protein:	gna1
Organism:	Schizosaccharomyces pombe
Length:	111 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gna1.

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	99.0	[0..11]	[109..44]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	96.0	[0..5]	[109..53]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	96.0	[0..13]	[109..45]
gi\|14590218, gi\|... - gi\|3256685\|dbj\|BAA29368.1\| 172aa long hypothetical acetyltransferase [Pyrococcus horikoshii OT3], gi... gi\|7451125 - pir\|\|A71455 probable acetyltransferase - Pyrococcus horikoshii	95.0	[0..5]	[109..53]
gi\|18976639, gi\|... - gi\|18976639\|ref\|NP_577996.1\| ribosomal protein s18 alanine acetyltransferase [Pyrococcus furiosus DS...	94.0	[0..5]	[109..51]
gi\|57642149, gi\|... - gi\|57642149\|ref\|YP_184627.1\| ribosomal protein-alanine acetyltransferase RimI-like protein [Thermoco...	94.0	[0..4]	[109..49]
gi\|78044332, gi\|... - gi\|78044332\|ref\|YP_359578.1\| ribosomal-protein-alanine acetyltransferase [Carboxydothermus hydrogeno...	94.0	[0..7]	[109..32]
Y1207_METJA, YC0... - (Q58604) Hypothetical acetyltransferase MJ1207 (EC 2.3.1.-), Uncharacterized N-acetyltransferase MJ1... Y1207_METJA - Uncharacterized N-acetyltransferase MJ1207 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM...	93.0	[0..13]	[104..125]
gi\|73980986 - gi\|73980986\|ref\|XP_540227.2\| PREDICTED: similar to putative N-acetyltransferase Camello 2 [Canis fam...	93.0	[0..1]	[102..165]
gi\|28204473, gi\|... - gi\|28212030\|ref\|NP_782974.1\| ribosomal-protein-alanine acetyltransferase [Clostridium tetani E88], g...	93.0	[0..1]	[108..37]

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Predicted Domain #1

Region A:
Residues: [1-111]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKDFHSTYY IIVVEDLESH HVIGTATLFL ERKFLRGKGI CGHIEEVIVH PDHQRKAIGK  60
   61 LMVLTLIKLA FSLNSYKVIL DCSDSNVGFY EKCGLSRAGI EMKKYASHSI I

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.045757
Match:	1i12A
Description:	Glucosamine-phoshate N-acetyltransferase GNA1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transferase activity	2.42798083712145	bayes_pls_golite062009
glucosamine 6-phosphate N-acetyltransferase activity	1.9998327970246	bayes_pls_golite062009
catalytic activity	1.97933499002461	bayes_pls_golite062009
N-acyltransferase activity	1.67458301402479	bayes_pls_golite062009
N-acetyltransferase activity	1.48038364316264	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.47571666298157	bayes_pls_golite062009
acyltransferase activity	1.47230586550141	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.42711272311757	bayes_pls_golite062009
histone acetyltransferase activity	0.96927652220298	bayes_pls_golite062009
lysine N-acetyltransferase activity	0.96927652220298	bayes_pls_golite062009
acetyltransferase activity	0.823367673029436	bayes_pls_golite062009
nucleic acid binding	0.707651383188015	bayes_pls_golite062009
binding	0.476482789192409	bayes_pls_golite062009
transcription regulator activity	0.441934451407805	bayes_pls_golite062009
transcription factor binding	0.15500618063483	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: