YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC14C4.10c
Organism:	Schizosaccharomyces pombe
Length:	329 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC14C4.10c.

Description	E-value	Query Range	Subject Range
gi\|40743133, gi\|... - gi\|67537944\|ref\|XP_662746.1\| hypothetical protein AN5142.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	182.0	[0..11]	[283..23]
gi\|115385839, gi... - gi\|115385839\|ref\|XP_001209466.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	144.0	[0..11]	[279..20]
gi\|83770944 - gi\|83770944\|dbj\|BAE61077.1\| unnamed protein product [Aspergillus oryzae] gi\|169764032 - gi\|169764032\|ref\|XP_001727916.1\| hypothetical protein [Aspergillus oryzae RIB40]	137.0	[0..6]	[279..20]
gi\|42553264, gi\|... - gi\|46125365\|ref\|XP_387236.1\| hypothetical protein FG07060.1 [Gibberella zeae PH-1], gi\|42553264\|gb\|E...	128.0	[0..3]	[245..71]
gi\|45915852, gi\|... - gi\|69276884\|ref\|ZP_00612356.1\| NUDIX hydrolase [Mesorhizobium sp. BNC1], gi\|68191783\|gb\|EAN06438.1\| ...	123.0	[0..28]	[245..33]
gi\|114569278, gi... - gi\|114569278\|ref\|YP_755958.1\| NUDIX hydrolase [Maricaulis maris MCS10], gi\|114339740\|gb\|ABI65020.1\| ...	123.0	[0..19]	[246..17]
gi\|225853032, gi... - gi\|225853032\|ref\|YP_002733265.1\| NUDIX hydrolase [Brucella melitensis ATCC 23457], gi\|225641397\|gb\|A... gi\|225627994, gi... - gi\|225627994\|ref\|ZP_03786030.1\| MutT/nudix family protein [Brucella ceti str. Cudo], gi\|225617157\|gb... gi\|62290438, gi\|... - gi\|62290438\|ref\|YP_222231.1\| MutT/nudix family protein [Brucella abortus bv. 1 str. 9-941], gi\|62196... gi\|254697884 - gi\|254697884\|ref\|ZP_05159712.1\| NUDIX hydrolase [Brucella abortus bv. 2 str. 86/8/59] gi\|254694229 - gi\|254694229\|ref\|ZP_05156057.1\| NUDIX hydrolase [Brucella abortus bv. 3 str. Tulya] gi\|254689740 - gi\|254689740\|ref\|ZP_05152994.1\| NUDIX hydrolase [Brucella abortus bv. 6 str. 870] gi\|237789244, gi... - gi\|237815946\|ref\|ZP_04594943.1\| MutT/nudix family protein [Brucella abortus str. 2308 A], gi\|2377892... gi\|254710591 - gi\|254710591\|ref\|ZP_05172402.1\| NUDIX hydrolase [Brucella pinnipedialis B2/94] gi\|254708221 - gi\|254708221\|ref\|ZP_05170049.1\| NUDIX hydrolase [Brucella pinnipedialis M163/99/10] gi\|254704807 - gi\|254704807\|ref\|ZP_05166635.1\| NUDIX hydrolase [Brucella suis bv. 3 str. 686] gi\|254702275 - gi\|254702275\|ref\|ZP_05164103.1\| NUDIX hydrolase [Brucella suis bv. 5 str. 513] gi\|254730775 - gi\|254730775\|ref\|ZP_05189353.1\| NUDIX hydrolase [Brucella abortus bv. 4 str. 292] gi\|189024668, gi... - gi\|189024668\|ref\|YP_001935436.1\| MutT/nudix family protein [Brucella abortus S19], gi\|189020240\|gb\|A... gi\|254717835 - gi\|254717835\|ref\|ZP_05179646.1\| NUDIX hydrolase [Brucella ceti M13/05/1] gi\|161619497, gi... - gi\|161619497\|ref\|YP_001593384.1\| NUDIX hydrolase [Brucella canis ATCC 23365], gi\|161336308\|gb\|ABX626... gi\|254714774 - gi\|254714774\|ref\|ZP_05176585.1\| NUDIX hydrolase [Brucella ceti M644/93/1]	122.0	[0..6]	[245..11]
gi\|145047114, gi... - gi\|145588708\|ref\|YP_001155305.1\| NUDIX hydrolase [Polynucleobacter necessarius subsp. asymbioticus Q...	122.0	[0..3]	[245..47]
gi\|33592129, gi\|... - gi\|33592129\|ref\|NP_879773.1\| hypothetical protein BP0976 [Bordetella pertussis Tohama I], gi\|3357177...	122.0	[0..2]	[249..14]
gi\|25526325 - pir\|\|AH3309 phosphohydrolase (mutT/nudiX family protein) BMEI0462 [imported] - Brucella melitensis (... gi\|17982372, gi\|... - gi\|17986745\|ref\|NP_539379.1\| phosphohydrolase (MUTT/NUDIX family protein) [Brucella melitensis 16M],...	122.0	[0..6]	[245..11]

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Predicted Domain #1

Region A:
Residues: [1-259]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELELDLLTG LQLLSEYCPR VTPNAPPRRA SVAVIIAFKE SQDFSNPKWP QCIPITSVPY  60
   61 VLLIQRSFRD TDRWSGHMAL PGGTRSLTDK SDIQTAHRET LEEVGIDLRK EHAHFVGALD 120
  121 ERVITSNWGQ FPLLLLSSFV FILPYMPSLR LQESEVFSAQ WYPLADLLLP ECQTRIQIDS 180
  181 SRALKKTYPR FIKTLFHLAV GNLMYSAIRL EFDPSSATYS LPPYQRPFLR GITHSIFVDL 240
  241 FIFLSPSSAR HCLCWSLPY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.522879
Match:	1nqyA
Description:	Coenzyme A pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [260-329]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FQHYDLRFIA SFFTQFYRLR LHQVYPRGNW VFTCLNGYYP YLKLTLLVGF LFRLFLVYLL  60
   61 FLIISAYYKS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits