| Protein: | SPAC607.06c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 612 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC607.06c.
| Description | E-value | Query Range |
Subject Range |
|
|
781.0 | [0..3] | [611..120] |
|
|
743.0 | [0..3] | [611..116] |
|
|
724.0 | [0..3] | [580..114] |
|
|
720.0 | [0..4] | [611..7] |
|
|
713.0 | [0..10] | [611..102] |
|
|
708.0 | [0..3] | [612..136] |
|
|
698.0 | [0..3] | [580..113] |
|
|
698.0 | [0..3] | [611..120] |
|
|
683.0 | [0..3] | [611..124] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MSQIILDNIS QNETVYNRFV IIHGRVGPRA SYCPQTINVK HHENSFPEQT WVVTDLYFKA 60
61 IIHVVPGDNT ILFTTDDGGK LELQVYYQLL VDNPFYCIAF IVGKDSDLSF DAPHGAKN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [119-320] |
1 11 21 31 41 51
| | | | | |
1 DIDEGIRKLR CAAYLWQAFT AECMYRNGYG RRSFRIEESV QPDTMSCLSP WGTERLTATI 60
61 NILRSDKTAE EIRSVPPDQL FHIAGDAVDK LHLPEPWHYM CMFLDTRYDP STQKIRGHVA 120
121 LGGGTDMHKL GVFGSHSLHS FPSALEYVVP VFSDARRIPS YLANDANESS TIWECANIGI 180
181 GAMLHELGHT LGCPHQPDGI ML
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1jizA |
| Description: | Macrophage elastase (MMP-12) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.43509040366727 | bayes_pls_golite062009 |
| hydrolase activity | 1.15944157140755 | bayes_pls_golite062009 |
| catalytic activity | 0.301168112279752 | bayes_pls_golite062009 |
| protein binding | 0.273409914175328 | bayes_pls_golite062009 |
|
Region A: Residues: [321-389] |
1 11 21 31 41 51
| | | | | |
1 RSYPIFNRSF TTREFECVRT GSKGLAPVLA KDECSWHHLD MLRFFYHPCF KLPSDPTYPS 60
61 DIETNYFVK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.449 | d.93.1 | SH2 domain |
| View | Download | 0.561 | a.74.1 | Cyclin-like |
| View | Download | 0.522 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.572 | a.4.12 | TrpR-like |
| View | Download | 0.463 | a.74.1 | Cyclin-like |
|
Region A: Residues: [390-612] |
1 11 21 31 41 51
| | | | | |
1 GETITFVNST GIFLIEIEYN GQTKGWKEFN PPVGEASLTD AEIRSLSNAS SNQDYRVRVL 60
61 SRNFKCIDLN NVPEIIKNAK VESSFGTVYR SERYGLRGCN GKELSNILIA PEKFKPTKIR 120
121 VHCGLALDGI EVFFGDESVL LGNRGGSPHD FEIQGSQIVG FQIRCGAWVD GISIVLENGK 180
181 TSPFYGNANG GGLKSYLVPK GFQLVGFYGT LGPFMDSIGF FIK
|
| Detection Method: | |
| Confidence: | 34.154902 |
| Match: | 1zgrA |
| Description: | Crystal structure of the Parkia platycephala seed lectin |
Matching Structure (courtesy of the PDB): |
|
