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View Structure Prediction Details

Protein: SPBC13A2.03
Organism: Schizosaccharomyces pombe
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC13A2.03.

Description E-value Query
Range
Subject
Range
gi|47125068 - gi|47125068|gb|AAH69879.1| Cds2 protein [Mus musculus]
384.0 [0..2] [427..22]
gi|114680827 - gi|114680827|ref|XP_001165937.1| PREDICTED: phosphatidate cytidylyltransferase 2 isoform 5 [Pan trog...
380.0 [0..2] [427..23]
gi|123981480, gi... - gi|123996313|gb|ABM85758.1| CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 [synt...
CDS2 - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
379.0 [0..2] [427..23]
CDS2_RAT - Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2 PE=1 SV=1
375.0 [0..2] [427..22]
gi|122890796, gi... - gi|68359998|ref|XP_702473.1| PREDICTED: hypothetical protein XP_697381 [Danio rerio], gi|122890796|e...
370.0 [0..2] [427..10]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKRTNKRN NSDKENGNVG VVQNKDSASS KTTEPARLTK HKSLARKPSQ NFITRTIWTF  60
   61 LLLGIFFTAL AMGHFWVVLL VTIVQIGVYK EVIAIASVPS REKDLPWTRF INWYFLMTTL 120
  121 YYAYGESIYA YFHHLFIMDS FMLPLVLHHR FISFMLYIIG FVLFVASLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGNYKFQFSQ FCWTHMTLLL VVGQSHFMIN NLFEGLFWFF VPVCYVVCND VFAYLCGKMF  60
   61 GKHPLIQVSP KKTVEGFLGG WICTVVIGSL ISYVLMHFKY FICPTRDLST SAFSGLNCTP 120
  121 NSVFLPHTYT IPAVFVDTFR LPETITLAPI YFHLAIFATF SSLIAPFGGF FASGLKRAFK 180
  181 IKDFGASIPG HGGLTDRMDC QFLNGVFVYM YFQSFIAEKS TSVADLLDTA VYSLTTTQQV 240
  241 QLVEDLQNYL ISHGKTSVQA ICSKLLQNSK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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