| Protein: | SPCC364.01 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 320 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for SPCC364.01.
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MSEEIITESI VKNFGSAETS VGEKQPKRKR SEVRAEKLKA RKLQKAAEIV QKQKENRKIL 60
61 KDVSLKRLSK SLDRSLPSEN TIDQISFNHA MSEEDA
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.891 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.891 | a.112.1 | Description not found. |
| View | Download | 0.713 | a.8.11 | Description not found. |
| View | Download | 0.553 | a.252.1 | Description not found. |
| View | Download | 0.523 | a.47.2 | t-snare proteins |
| View | Download | 0.523 | a.47.2 | t-snare proteins |
| View | Download | 0.522 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.522 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.495 | a.47.2 | t-snare proteins |
| View | Download | 0.484 | f.15.1 | Small-conductance potassium channel |
|
Region A: Residues: [97-217] |
1 11 21 31 41 51
| | | | | |
1 SGYQIGDKHK NLLLYKLSSS SGSVFTENLY STIQEFLSAQ KVDIADSKNT YVFGSTFDKK 60
61 SHALVKTSDS VRSLKYGSFV KACAPLFRFA SGIIKAHAPH FHQALLKLEL APSALRFGVF 120
121 P
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.886 | a.24.18 | Description not found. |
| View | Download | 0.816 | a.24.1 | Apolipoprotein |
| View | Download | 0.816 | a.24.1 | Apolipoprotein |
| View | Download | 0.746 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.670 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.643 | d.110.4 | SNARE-like |
| View | Download | 0.643 | d.110.4 | SNARE-like |
| View | Download | 0.642 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.618 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.596 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
|
Region A: Residues: [218-320] |
1 11 21 31 41 51
| | | | | |
1 NFSLQSVSNG YMSMESNFSS IKYGFVVIII VGELNDVELK IPAISHSLKL KDGSILVLRS 60
61 SLLHQWYSLP KQSILYEIRL FAMSSLWHYE KNKSIKIAKK DDI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.892 | d.20.1 | UBC-like |
| View | Download | 0.883 | d.20.1 | UBC-like |
| View | Download | 0.645 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.641 | a.158.1 | F-box domain |
| View | Download | 0.641 | a.158.1 | F-box domain |
| View | Download | 0.592 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.592 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.591 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.591 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.558 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
