Protein: | SPAC26H5.07c |
Organism: | Schizosaccharomyces pombe |
Length: | 505 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC26H5.07c.
Description | E-value | Query Range |
Subject Range |
|
490.0 | [0..5] | [463..3] |
|
477.0 | [0..1] | [500..1] |
|
455.0 | [0..20] | [476..20] |
|
454.0 | [0..4] | [480..9] |
|
446.0 | [0..9] | [495..11] |
|
431.0 | [0..12] | [474..8] |
|
428.0 | [0..4] | [498..1] |
|
423.0 | [0..9] | [480..4] |
Region A: Residues: [1-128] |
1 11 21 31 41 51 | | | | | | 1 MAILKSALVG FICFLHFFIV NASDNKSLLT EDIMASQVCN GMFAKKGKTS EITLKIDSYT 60 61 SDFGGAIRLL IFNWKDVNAI GMEDDDGEKH YICNYEDIEA GVCKDDDYGL YLINQTAPHD 120 121 SIYSAAVD |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [129-505] |
1 11 21 31 41 51 | | | | | | 1 AESMVSPLKY PVEQSGLYCV FTAPLEGSSE AYKITVTWEN YFGNLDATDY PHLFLNPILL 60 61 AINCLIGIWW SFIMFRYRHD LLQVQKYISG VVALSIVCTM VSTGYFYFAN SKGYTTGSKV 120 121 FAFFLSLAQS ARQSYFGFLL LIVSLGYSIV VPSLGSLLRK CQILAGLQFV SSCFFLSSLF 180 181 ISPSNKESLV ILFAAPVFLI TLFAMFLWIV LALNNTIRDL RIRKQTVKAQ MYTRLWIVIC 240 241 FGIVAYASIV AANAILIGIY GQMNYYLKYW KLLWFLNYGY TDILVLILML TILYLWRPTE 300 301 NNRRFAMSEQ VAQDVDEFEM TSSLSNDSLH LHHERPTSPA NPHIIHGSAD EHQALFAVDD 360 361 ESDDDASTLA TSKQKPA |
Detection Method: | ![]() |
Confidence: | 1.28 |
Match: | 1f88A |
Description: | Rhodopsin |
Matching Structure (courtesy of the PDB):![]() |