YRC Public Data Repository - Protein Structure Prediction

Protein:	mgr2
Organism:	Schizosaccharomyces pombe
Length:	120 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mgr2.

Description	E-value	Query Range	Subject Range
gi\|23451265, gi\|... - gi\|23451265\|gb\|AAN32721.1\|AF421374_2 unknown [Schizosaccharomyces pombe], gi\|1236262\|dbj\|BAA12187.1\|...	155.0	[0..14]	[120..1]
gi\|44981111 - gi\|44981111\|gb\|AAS50963.1\| ABR191Cp [Ashbya gossypii ATCC 10895] gi\|44981111, gi\|... - gi\|45185422\|ref\|NP_983139.1\| ABR191Cp [Ashbya gossypii ATCC 10895], gi\|44981111\|gb\|AAS50963.1\| ABR19...	127.0	[0..4]	[88..12]
MGR2_YEAST - Protein MGR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGR2 PE=1 SV=1 MGR2 - Protein required for growth of cells lacking the mitochondrial genome	124.0	[0..3]	[88..10]
gi\|50310063, gi\|... - gi\|50310063\|ref\|XP_455045.1\| unnamed protein product [Kluyveromyces lactis], gi\|49644180\|emb\|CAH0013... gi\|49644180 - gi\|49644180\|emb\|CAH00132.1\| KLLA0E24289p [Kluyveromyces lactis]	122.0	[0..2]	[75..10]
gi\|67536926, gi\|... - gi\|67536926\|ref\|XP_662237.1\| hypothetical protein AN4633.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	118.0	[0..2]	[98..9]
gi\|49526357 - gi\|49526357\|emb\|CAG59981.1\| unnamed protein product [Candida glabrata] gi\|50289235, gi\|... - gi\|50289235\|ref\|XP_447048.1\| unnamed protein product [Candida glabrata], gi\|49526357\|emb\|CAG59981.1\|...	116.0	[0..1]	[88..8]
gi\|70989057, gi\|... - gi\|70989057\|ref\|XP_749378.1\| mitochondrial genome maintenance protein Mgr2 [Aspergillus fumigatus Af... gi\|159128792 - gi\|159128792\|gb\|EDP53906.1\| mitochondrial genome maintenance protein Mgr2, putative [Aspergillus fum... gi\|119498101, gi... - gi\|119498101\|ref\|XP_001265808.1\| mitochondrial genome maintenance protein Mgr2, putative [Neosartory...	116.0	[0..2]	[96..9]
gi\|83774897 - gi\|83774897\|dbj\|BAE65020.1\| unnamed protein product [Aspergillus oryzae] gi\|169783382 - gi\|169783382\|ref\|XP_001826153.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238493169, gi... - gi\|238493169\|ref\|XP_002377821.1\| mitochondrial genome maintenance protein Mgr2, putative [Aspergillu...	115.0	[0..2]	[96..9]
gi\|46440715, gi\|... - gi\|68474051\|ref\|XP_718922.1\| hypothetical protein CaO19.13483 [Candida albicans SC5314], gi\|68473842... orf19.13483, orf... - orf19.6062 CGDID:CAL0005161 Assembly 19, Contig19-10237 (126026, 125706) CDS, reverse complemented, ... gi\|238879452 - gi\|238879452\|gb\|EEQ43090.1\| hypothetical protein CAWG_01327 [Candida albicans WO-1]	114.0	[0..3]	[74..11]
gi\|50557122, gi\|... - gi\|50557122\|ref\|XP_505969.1\| YALI0F27929p [Yarrowia lipolytica], gi\|49651839\|emb\|CAG78781.1\| unnamed... gi\|49651839 - gi\|49651839\|emb\|CAG78781.1\| YALI0F27929p [Yarrowia lipolytica]	114.0	[0..3]	[79..12]

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Predicted Domain #1

Region A:
Residues: [1-120]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSMQPSTVD KLKMGAIMGS AAGLGIGFLF GGVAVLRYGP GPRGFLRTLG QYMLTSAATF  60
   61 GFFMSIGSVI RNEDIPLIQQ SGSHWNQRLL NENANSSRIF ALAMQQAKSS PRKSNEVAEC 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.973	a.1.1	Globin-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits