YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC23G7.13c
Organism:	Schizosaccharomyces pombe
Length:	664 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC23G7.13c.

Description	E-value	Query Range	Subject Range
gi\|42550008, gi\|... - gi\|46114538\|ref\|XP_383287.1\| hypothetical protein FG03111.1 [Gibberella zeae PH-1], gi\|42550008\|gb\|E...	318.0	[0..2]	[645..12]
gi\|85090209 - gi\|85090209\|ref\|XP_958308.1\| urea active transporter [Neurospora crassa OR74A] gi\|32418358, gi\|... - gi\|32418358\|ref\|XP_329657.1\| hypothetical protein [Neurospora crassa], gi\|28919657\|gb\|EAA29072.1\| ur...	309.0	[0..2]	[650..13]
gi\|86196181, gi\|... - gi\|86196181\|gb\|EAQ70819.1\| hypothetical protein MGCH7_ch7g226 [Magnaporthe grisea 70-15], gi\|3995613...	308.0	[0..2]	[651..5]
gi\|44980930 - gi\|44980930\|gb\|AAS50813.1\| ABR043Wp [Ashbya gossypii ATCC 10895] gi\|45185272, gi\|... - gi\|45185272\|ref\|NP_982989.1\| ABR043Wp [Ashbya gossypii ATCC 10895], gi\|44980930\|gb\|AAS50813.1\| ABR04...	294.0	[0..4]	[631..6]
gi\|50291859, gi\|... - gi\|50291859\|ref\|XP_448362.1\| unnamed protein product [Candida glabrata], gi\|49527674\|emb\|CAG61323.1\|... gi\|49527674 - gi\|49527674\|emb\|CAG61323.1\| unnamed protein product [Candida glabrata]	294.0	[0..4]	[642..6]
gi\|49642113 - gi\|49642113\|emb\|CAH01831.1\| KLLA0C17468p [Kluyveromyces lactis] gi\|50306037, gi\|... - gi\|50306037\|ref\|XP_452980.1\| unnamed protein product [Kluyveromyces lactis], gi\|49642113\|emb\|CAH0183...	293.0	[0..2]	[648..4]
orf19.8403, orf1... - orf19.781 CGDID:CAL0001976 Assembly 19, Contig19-10073 (68688, 66511) CDS, reverse complemented, tra... gi\|238879070 - gi\|238879070\|gb\|EEQ42708.1\| urea active transporter [Candida albicans WO-1] gi\|46435134, gi\|... - gi\|68485050\|ref\|XP_713591.1\| potential urea active transport protein [Candida albicans SC5314], gi\|6...	291.0	[0..5]	[628..7]
gi\|88182721, gi\|... - gi\|88182721\|gb\|EAQ90189.1\| hypothetical protein CHGG_06808 [Chaetomium globosum CBS 148.51], gi\|1161...	289.0	[0..4]	[647..14]
SPAC869.03c - urea transporter DUR33_SCHPO - Probable urea active transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dur3-3 ...	286.0	[0..1]	[653..1]
gi\|49084768, gi\|... - gi\|67516273\|ref\|XP_658022.1\| hypothetical protein AN0418.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	285.0	[0..4]	[650..20]

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Predicted Domain #1

Region A:
Residues: [1-239]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQPELTQSV GYGIVVGLGL GFAALMIFVS WSLKKFNNEN QTSEHFNTAS HSVRTGLVAS  60
   61 AVVSSWTWAS TLLTSAQKTY QYGVSGAFWY ASGACVQILL FTVLAIELKR KAPNAHTFLE 120
  121 VVRARCGPIA HGVFLVFAYI TNILVMAMLL CGGSATISSV TGMNTVAVCF LLPVGVIIYT 180
  181 MFGGIKATFL TDYIHTVIIL VILIMFSLAT YSADKKIGSP GKLYDMLKEA GDAHPVAGN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [240-327]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AQGSYLTMRS QEGAIFFIIN LAGNFGTVFV DNGYWQKAIA ANPASALPGY ILGGLAWFAI  60
   61 PWLAATTMGL VALGLENKPY FPTYPNRM

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [328-519]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDLEVSEGLV LPYAAIALMG RAGANATLLL VFMAVTSAAS AELIAVSSIF TYDIYKQYVR  60
   61 PRATGKELLY TGHASLIVFG FAMSGFATGL YYGQVSMGYL YLLMGVLVCP AVVPATCVML 120
  121 FSRVSTIAVT VSPVLGIISS IITWLVVARA EGGKTLTIET TGANNPMLAG NVVGLLSPAL 180
  181 YILILSIIFP EK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [520-664]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YDFNRLLATF AMHFSSEEDE IQQTKKLNRA SVISKVAALI ITAAFIILWP WPMYGTGYIF  60
   61 SKRFFTGWVV VGLIWIFFTV FAVGIFPLWE GRNDIYQVVS NMAASIFGRK VNDIVEDEGV 120
  121 VVETISIGSG SKEKVNFEKK DIESV

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits