| Protein: | SPBC25B2.03 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 554 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC25B2.03.
| Description | E-value | Query Range |
Subject Range |
|
|
449.0 | [0..9] | [376..87] |
|
|
437.0 | [0..7] | [372..72] |
|
|
411.0 | [0..7] | [365..90] |
|
|
406.0 | [0..9] | [381..85] |
|
|
405.0 | [0..6] | [369..90] |
|
|
374.0 | [0..7] | [369..92] |
|
|
362.0 | [0..7] | [367..88] |
|
|
359.0 | [0..7] | [367..94] |
|
|
352.0 | [0..9] | [372..92] |
|
|
347.0 | [0..7] | [367..86] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MGNTIGKERQ ENDEELIQHL VQLVDGGFLD PQGVYSSAPA YKTNIVRKLM LERRLMPFYK 60
61 GLDSYSKDWP ADKVVEVVEK ALGPHKSALL HCAIRQSRSL SVGNTRSLKR DSRGSSDHLL 120
121 TRNRSNSTPG SISADYRTTA ITTIYANAME CPICFLYYPS NFNYTRCCAQ PICSECFVEI 180
181 RRAEPHLPTV HANEPTPNEF DLISEPAKCP YCMTERFGVI YKPNPKLTPF SFNNNPDTLP 240
241 SNIAPMGTLS KSSLPLHHIP WPPNQHIKFA HDDKNVVST
|
| Detection Method: |  |
| Confidence: | 0.991 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.18807294523099 | bayes_pls_golite062009 |
| protein binding | 1.3899161465056 | bayes_pls_golite062009 |
| hydrolase activity | 0.612485742121248 | bayes_pls_golite062009 |
| clathrin binding | 0.536431227881258 | bayes_pls_golite062009 |
| DNA binding | 0.323179972743082 | bayes_pls_golite062009 |
|
Region A: Residues: [280-376] |
1 11 21 31 41 51
| | | | | |
1 DFIHPDWQYK LERARRRALR RAANATLLNS HLLETGPANA NANHNTDLSH DPTSHGGPRR 60
61 TLSSRRQHYL ANVEQLMLAE AIRQSLLDAQ SNDSTNS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.322 | 0.913 | vacuolar membrane | a.47.2 | t-snare proteins |
| View | Download | 0.513 | 0.029 | vacuolar membrane | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.314 | 0.001 | vacuolar membrane | a.24.11 | Bacterial GAP domain |
| View | Download | 0.266 | 0.001 | vacuolar membrane | a.130.1 | Chorismate mutase II |
| View | Download | 0.412 | 0.001 | vacuolar membrane | a.46.1 | Methionine synthase domain |
|
Region A: Residues: [377-554] |
1 11 21 31 41 51
| | | | | |
1 LPSTEVSQPD STNISNEQEI VQPQPTHTTN VALVEEINRP DSVESAITAS SSIDTGNENE 60
61 TQEVNSDSLP QFVHQTMTQT NFQESSPSVA ADETRVHNVD EYIEQQDLDE LIHSPIASTN 120
121 PFLADQFARS ETVDLNAHIC SPALSVSDDG VTATNKTQSS FPSVYEHQLK SNELERGH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
